Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233955.1_202017-07-27] 11,382 sequences; 59,420,771 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq154 279 8e-73 seq9 104 4e-20 >seq154 Length=7942 Score = 279 bits (308), Expect = 8e-73 Identities = 202/229 (88%), Gaps = 5/229 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 4201 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 4258 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | |||||| Sbjct 4259 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 4318 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||||||| |||| ||||| || |||| || | | ||||||||||||||||||| Sbjct 4319 ACCCGGACCTTTCGGACAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 4376 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4377 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 4425 >seq9 Length=577821 Score = 104 bits (114), Expect = 4e-20 Identities = 117/152 (77%), Gaps = 5/152 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||| || ||||| ||||| | |||| || |||| |||||||||||| ||| | Sbjct 125032 GTACAAAGGGAAGCGACGTGATCAACACAAGCT-GACGACTTGCGCTTACTAGGGATT-C 124975 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| | ||| ||| ||||||| || ||||| | ||| | |||||| Sbjct 124974 CTCGTTGAAGAGCAATAGTTGAAATACTCTATCCACAGCACGACAGAGTTTAACAAGATT 124915 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCG 151 ||| ||||| || ||| ||| | ||||| Sbjct 124914 GCCCTGACCTCCTGGACAA--TGAAACACTCG 124885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751917082130