Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233955.1_202017-07-27]
11,382 sequences; 59,420,771 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq154 237 3e-60
>seq154
Length=7942
Score = 237 bits (262), Expect = 3e-60
Identities = 226/282 (80%), Gaps = 14/282 (5%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 597 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 540
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 539 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 480
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | | || |||| | ||| ||| | |||||||||||||| |
Sbjct 479 GAACGCGGTGATAC-CACCCGCACGT-ATAGATGGACAAGAATAGGCTTCGGCTTAGCGT 422
Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||||||||| | | |||| || |||||||| | | | | | ||| ||
Sbjct 421 CTTAGCAGGCGATTCTTCCACGGCGCTC-----GAAGCGCGTCGTGGT-ATTTCGCGTAT 368
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||||| || | || ||| ||||||||||||||||||
Sbjct 367 TGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819109672448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |