Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233985.1_202017-07-27]
1,275 sequences; 50,410,650 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq146 91.5 4e-16
seq296 77.0 1e-11
>seq146
Length=47610
Score = 91.5 bits (100), Expect = 4e-16
Identities = 140/198 (71%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354
|||||| | | ||| |||||||| || | || | ||||||| | |||||| |||
Sbjct 1582 GGGGACAAAGACAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATTC 1641
Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413
| | |||||| | || ||| | || | |||| |||| || ||| | | | | | ||
Sbjct 1642 CTAAACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCAAAAAATAGGATATAAATT 1701
Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470
||||||||||||| || ||||||| ||||| | ||| ||||||||||| |||
Sbjct 1702 TTAAGGATTGTAGTCTGAAATTCGACTACATGAATAAGTAATTACTAGTAATCGTGAATC 1761
Query 471 AGCATGCTACGGTGAATA 488
| |||| ||||||||||
Sbjct 1762 ACCATGTCACGGTGAATA 1779
>seq296
Length=1297
Score = 77.0 bits (84), Expect = 1e-11
Identities = 130/186 (70%), Gaps = 8/186 (4%)
Strand=Plus/Plus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||| ||| || ||| | ||||||| | |||||| ||| | | ||||||||
Sbjct 310 CAAGTCATTATGGCCTAAATGCTGTGGGCTATAGACGTGCCACATACGCCTTTACAAAGG 369
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCC---ATAAAGTTGTTCTCAGTTCGGATTGTA 422
| || | | | || | ||| |||||| |||| | | | | ||||||||
Sbjct 370 GATGCTATATTGTGAAATGGAGCTAATCCCCAAATAAGGAAAT----ATTATGGATTGTA 425
Query 423 GTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCAT-GCTACG 481
||||| |||||||||| ||||| ||||| ||||||||||| |||| ||| | |||
Sbjct 426 GTCTGTAACTCGACTACATGAAAAAGGAATTACTAGTAATCGTGAATCACCATCGTCACG 485
Query 482 GTGAAT 487
||||||
Sbjct 486 GTGAAT 491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503980824000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |