Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233985.1_202017-07-27] 1,275 sequences; 50,410,650 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq146 91.5 4e-16 seq296 77.0 1e-11 >seq146 Length=47610 Score = 91.5 bits (100), Expect = 4e-16 Identities = 140/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354 |||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| Sbjct 1582 GGGGACAAAGACAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATTC 1641 Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413 | | |||||| | || ||| | || | |||| |||| || ||| | | | | | || Sbjct 1642 CTAAACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCAAAAAATAGGATATAAATT 1701 Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 ||||||||||||| || ||||||| ||||| | ||| ||||||||||| ||| Sbjct 1702 TTAAGGATTGTAGTCTGAAATTCGACTACATGAATAAGTAATTACTAGTAATCGTGAATC 1761 Query 471 AGCATGCTACGGTGAATA 488 | |||| |||||||||| Sbjct 1762 ACCATGTCACGGTGAATA 1779 >seq296 Length=1297 Score = 77.0 bits (84), Expect = 1e-11 Identities = 130/186 (70%), Gaps = 8/186 (4%) Strand=Plus/Plus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||| ||| || ||| | ||||||| | |||||| ||| | | |||||||| Sbjct 310 CAAGTCATTATGGCCTAAATGCTGTGGGCTATAGACGTGCCACATACGCCTTTACAAAGG 369 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCC---ATAAAGTTGTTCTCAGTTCGGATTGTA 422 | || | | | || | ||| |||||| |||| | | | | |||||||| Sbjct 370 GATGCTATATTGTGAAATGGAGCTAATCCCCAAATAAGGAAAT----ATTATGGATTGTA 425 Query 423 GTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCAT-GCTACG 481 ||||| |||||||||| ||||| ||||| ||||||||||| |||| ||| | ||| Sbjct 426 GTCTGTAACTCGACTACATGAAAAAGGAATTACTAGTAATCGTGAATCACCATCGTCACG 485 Query 482 GTGAAT 487 |||||| Sbjct 486 GTGAAT 491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503980824000