Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233995.1_202017-07-27]
488 sequences; 47,233,678 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq457 145 2e-32
>seq457
Length=52318
Score = 145 bits (160), Expect = 2e-32
Identities = 203/279 (73%), Gaps = 8/279 (3%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| |||||| ||| ||||||||||||||| | ||||||||
Sbjct 34083 TAAACTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 34142
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
|||||||| ||||| |||| | | | | ||| | | ||||| |||||||||||||||||
Sbjct 34143 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 34202
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC---TTCGCGT-TAGC 182
|| | | |||| ||||||| || ||||||| ||| || | | | | || ||
Sbjct 34203 CCCTCA-CGTTAAGGCCGCCTTTAACCGGGGTTTCCGTCTACATCAAATATTAGTATATT 34261
Query 183 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTT 241
||| ||| |||||| |||||||||||||| | |||||| |||||| | | |||
Sbjct 34262 TAATTATATCTGTTAACCAGCCGGCACCGGGCAGACATCACACTCTATACTTAGATTTTT 34321
Query 242 CGTGTTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| ||| ||| ||||||||||||| | ||||||||||
Sbjct 34322 AATCTTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 34360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260793847296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |