Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702495
.1_202016-08-10] 1,129 sequences; 48,892,912 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq364 118 4e-21
>seq364
Length=82293
Score = 118 bits (130), Expect = 4e-21
Identities = 216/314 (69%), Gaps = 2/314 (1%)
Strand=Plus/Plus
Query 12733 AACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACC 12792
||||||||| ||| || ||||| || | | ||| || ||||| || | |||||||||
Sbjct 45910 AACATCGTAGTAGATGACGTTCATACCCATAGCCTCAGCGAGGACGGACAGCTGAGAACC 45969
Query 12793 AATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGA 12852
||||| || || || || ||||| || ||||| |||| || || | || || | |||
Sbjct 45970 AATGTGGCCGTAGCCAACGATACCCAGAGTCTTGCCTCGAATCTCCCAGC-ACTTGGAGC 46028
Query 12853 AG-TCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAA 12911
| ||||||||| ||||| |||| | || ||| || ||| |||| |||||| | ||
Sbjct 46029 TGACCTTGTTCCAGGTGCCTCGGTGCATCTCGTTGGATCGATCGCCAAGCTGACGGGCAA 46088
Query 12912 GATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAAT 12971
|| || | | | |||| ||||| || || || | | |||| ||||| || |
Sbjct 46089 GAACGATGATCTCGGCGATGACCAGCTCAGCGACACTGCGCGAGTTGGCGAAGGGGGAGT 46148
Query 12972 TAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGC 13031
| ||||| ||||| || |||| || | || || | ||||| | | ||| || |
Sbjct 46149 TGAAGACGGCAATACCATTCTTGGCGGCGAACTCAAGGTCGACCTGGTTGGTACCGATAC 46208
Query 13032 AGAAGCATCCTATG 13045
||||||| || |||
Sbjct 46209 AGAAGCAGCCGATG 46222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884859134529197
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |