Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702545 .1_202016-08-10] 3,866 sequences; 57,435,926 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2945 367 2e-99 >seq2945 Length=7868 Score = 367 bits (406), Expect = 2e-99 Identities = 239/259 (92%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2106 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2047 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| Sbjct 2046 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 1988 Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | ||| || | || |||||||||||||||||||||||||||||||||||| |||| Sbjct 1987 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 1929 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 1928 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 1869 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 1868 AAAGAGCTCTCAATCTGTC 1850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796770158346