Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702555 .1_202016-08-10] 3,634 sequences; 56,857,404 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1258 91.5 4e-16 >seq1258 Length=50783 Score = 91.5 bits (100), Expect = 4e-16 Identities = 140/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354 |||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| Sbjct 29555 GGGGACAAAGACAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATTC 29614 Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413 | | |||||| | || ||| | || | |||| |||| || ||| | | | | | || Sbjct 29615 CTAAACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCAAAAAATAGGATATAAATT 29674 Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 ||||||||||||| || ||||||| ||||| | ||| ||||||||||| ||| Sbjct 29675 TTAAGGATTGTAGTCTGAAATTCGACTACATGAATAAGTAATTACTAGTAATCGTGAATC 29734 Query 471 AGCATGCTACGGTGAATA 488 | |||| |||||||||| Sbjct 29735 ACCATGTCACGGTGAATA 29752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503945344640