Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702655
.1_202016-08-10] 1,501 sequences; 51,609,830 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq1403 122 3e-22
>seq1403
Length=757572
Score = 122 bits (134), Expect = 3e-22
Identities = 217/314 (69%), Gaps = 2/314 (1%)
Strand=Plus/Plus
Query 12733 AACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACC 12792
||||||||| ||| || ||||| || | | ||| || ||||| || | |||||||||
Sbjct 73201 AACATCGTAGTAGATGACGTTCATACCCATAGCCTCAGCGAGGACGGACAGCTGAGAACC 73260
Query 12793 AATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGA 12852
||||| ||| || || || ||||| || ||||| |||| || || | || || | |||
Sbjct 73261 AATGTGACCGTAGCCAACGATACCCAGAGTCTTGCCTCGAATCTCCCAGC-ACTTGGAGC 73319
Query 12853 AG-TCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAA 12911
| ||||||||| ||||| |||| | || ||| || ||| |||| |||||| | ||
Sbjct 73320 TGACCTTGTTCCAGGTGCCTCGGTGCATCTCGTTGGATCGATCGCCAAGCTGACGGGCAA 73379
Query 12912 GATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAAT 12971
|| || | | | |||| ||||| || || || | | |||| ||||| || |
Sbjct 73380 GAACGATGATCTCGGCGATGACCAGCTCAGCAACACTGCGCGAGTTGGCGAAGGGGGAGT 73439
Query 12972 TAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGC 13031
| ||||| ||||| || |||| || | || || | ||||| | | ||| || |
Sbjct 73440 TGAAGACGGCAATACCATTCTTGGCGGCGAACTCAAGGTCGACCTGGTTGGTACCGATAC 73499
Query 13032 AGAAGCATCCTATG 13045
||||||| || |||
Sbjct 73500 AGAAGCAGCCGATG 73513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884850150689393
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |