Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233895.1_ 202017-07-27] 2,454 sequences; 53,227,347 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq225 365 4e-96 seq2256 212 5e-50 >seq225 Length=1102471 Score = 365 bits (404), Expect = 4e-96 Identities = 1226/1880 (65%), Gaps = 50/1880 (3%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| || | | |||||| |||| || | ||| ||||||||||| || Sbjct 391895 ATCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCAGT 391836 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGC 65194 ||| |||||| ||| || | ||| ||||| || | || |||| | | | || Sbjct 391835 CTTAAGGCCAAGCTTCCA-GCCTGCAAAGTGCATAC-TGGTGATCTTGCCCATTGTGGGG 391778 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || |||| ||||| |||||| ||| | ||| ||||| |||||| Sbjct 391777 TCTTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCC 391718 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | || || | || || |||||||| |||||||| ||||| | | | || || Sbjct 391717 ATCTGAACGACTTGGCGCTGAGAGATCTCCCAAACGGTCTTATACAGA-GCCTTGACATC 391659 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 || || | ||||| ||| | |||||| ||||| ||||| || ||| Sbjct 391658 GGCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCAT 391599 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431 | || ||||||| ||||| |||| ||| | |||| | || | | |||| || Sbjct 391598 AGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC--AGCCAGGGGTTGACAACC 391541 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||||| || | || ||||| || ||||||||||| ||| ||| || ||| | Sbjct 391540 TGGAACTCACCAGCGAGAACACGTCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCAC 391481 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| ||||| |||| ||| ||||| ||||| ||||| | | || | Sbjct 391480 TCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTG 391421 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACATCGGTTT 65610 || || | |||| | | | | | || | | || ||||||| ||| | | | Sbjct 391420 TTACGGATGCCGTGTGTCTTGACTTCCTCTCGAAGAGTC-TCCCAGTCCCAGA---GGTC 391365 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 | | | | | ||| |||||| || || ||| | || | ||| || ||||| Sbjct 391364 AGAG--GGCTTG-ACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGGGAACC 391308 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730 ||| | ||| ||||||||||| || || || | || ||| || || Sbjct 391307 TTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAGGCAGTGAGGGCAGC 391248 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGG 65790 |||||||||||||| || | || || ||||| ||||| |||| | || Sbjct 391247 GTGGTAAATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGG 391188 Query 65791 CATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 ||| | || | |||| ||||| || || ||||| |||| ||| ||||| || || Sbjct 391187 CATGCGCAGAGCAAGGAAAGCATCGGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTG 391128 Query 65851 ACGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 |||| || | || || |||| | |||||||||| || | |||||| || Sbjct 391127 GCGCATGTT--ACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTG 391070 Query 65909 TTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTA 65968 |||| ||||| | || || || || |||| | | ||| ||| || Sbjct 391069 TTCAGGTTGCGAATAACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCA-------TA 391017 Query 65969 GGACG----ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTT 66024 | | | |||| || | | | | ||| || || ||||| || ||||| Sbjct 391016 GCAAGCCTCATCGTAGTTGATGAA------AGA---GGGCAGAGCCAGAGAGGCAAGGTT 390966 Query 66025 GCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCA 66084 ||||||||| | ||||||||| || ||||| | |||||| |||||||| || || Sbjct 390965 GCAGACAGCGACCTCGTCAGGGGCACAGTACTCAATAATTTCAGTGCACAGGTTGGAGCT 390906 Query 66085 GCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCAT 66144 || ||||| || | |||| ||| || |||||||| ||||| ||||||||||| | ||| Sbjct 390905 TCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCAT 390846 Query 66145 GTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTT 66204 | | || | ||||||||| |||| ||||| ||||||| |||||| | ||||| Sbjct 390845 GAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCCTT 390786 Query 66205 CACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATT 66263 | || | | | |||| | | | | ||||| | |||||| || ||||| | Sbjct 390785 GATAGT-CTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCT 390727 Query 66264 CACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCAT 66323 | || | |||| || | || |||| || || |||||||||| ||| || || | Sbjct 390726 CTCCGTAACAGTCGGCGAGGCCAGGGCACTCGTTAGGGCACATCAGCGTCCAGTCGCCGT 390667 Query 66324 CCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG 66383 || ||| ||||| ||| || |||||||| ||||| |||||| ||| || || || | Sbjct 390666 TCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCGAGGAAAAGGTCACGGG 390607 Query 66384 CTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCAT 66443 | || |||||| | ||||| || || || | || |||||||| |||| || | | Sbjct 390606 CACGGACCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGT 390547 Query 66444 GCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGT 66503 |||| || || ||||||||||| || | || || ||| |||||| |||||||| | Sbjct 390546 GCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACAT 390487 Query 66504 AGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGG 66563 ||||||| |||||||||||||| | ||| || || | ||||| ||| | || |||| Sbjct 390486 AGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCGTTCGATGTACCGTTGG 390427 Query 66564 TGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGG 66623 | ||| | ||| ||| || || || ||| ||| || ||||| ||||||||||| | Sbjct 390426 TACCGGCAATGTAGGAGCCAGTAGCACGGATACGGTGCACGTTCAGGCCAATACCACCAG 390367 Query 66624 CCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTC 66681 || |||| ||||| ||||| || | | | || | | || || ||||| ||| Sbjct 390366 CCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC--GTAGATTCCCTCAATACTGTC 390309 Query 66682 ACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAA 66741 |||| || | | | |||| || | |||||| | || ||| |||| ||| Sbjct 390308 GTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCGTTGAA 390249 Query 66742 GAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGAC 66801 ||| ||||| | || || || ||| | | || ||||| ||||| ||||| | ||| Sbjct 390248 GAGCGTGGGAGAGGCATGTGTGAAGAATTTGCTGGACATCAGGTTGTATGTCTCCAAGAC 390189 Query 66802 AGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCC 66860 || || | || || ||| || | | |||| ||||| | | || ||||| | Sbjct 390188 TCGCTCGATATCATCACCCCAAATACCAACAGACACA-CGCATGATCATGTGCTGAGGGC 390130 Query 66861 GTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAA 66920 | ||||| | | | | | || | | | ||| || || |||| ||||||| |||| Sbjct 390129 GCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAA 390070 Query 66921 AGTACGAGTAATTGAAATCG 66940 |||| ||| | ||||||| Sbjct 390069 AGTATTGGTATTGGAAATCG 390050 >seq2256 Length=1610869 Score = 212 bits (234), Expect = 5e-50 Identities = 566/856 (66%), Gaps = 22/856 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || |||||||||||||| | |||||| | ||| | Sbjct 1497866 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTT 1497807 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | |||||||| | || | | || ||| || ||| | Sbjct 1497806 TCCAAGGATCTCCATGACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCT 1497747 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || || ||||| ||||| ||||| | | || || Sbjct 1497746 CACATCCTTGCTTTCTTCGCTGCGTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCGA 1497687 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| ||||| || | | ||||| ||||| ||||||||||||||||| ||| Sbjct 1497686 TTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATG 1497627 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| ||||||| |||| ||| | ||||| || || ||||||| ||||| || Sbjct 1497626 GAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGACACCTACATCAAGGAGCCCGCC 1497567 Query 61384 GAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG---- 61438 | || | | | | || || ||||| ||||| || || || | | ||||| Sbjct 1497566 CAGCGA-ACCTACCTCTTTAACGCCATTGAGACCATCCCC----TGCATCCGAAAGAAGG 1497512 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA--TTTGGTGAACGATTGCT 61496 | || |||||| || |||||| ||| | || | || | |||| | || | | Sbjct 1497511 CCGACTGGGCCATCCGATGGATC--CAGGATAAGGACTCCTCCTTTGCCCAGCGTCTCGT 1497454 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || || || | || |||||| | || |||||||| | || ||| | ||||| ||| | Sbjct 1497453 TGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCT 1497394 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| ||||| || |||||||||||||||||| ||| ||| | || || || || || Sbjct 1497393 CAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGA 1497334 Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCCGT 61675 ||| | || ||| ||||| | || || || || | || | |||| | Sbjct 1497333 GGGTCTTCACACTGACTTTGC---CTGCCTCCTC-CACTCTCACCTCAAGGGTCGTGCCA 1497278 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 || || | || || || ||| || || || || || ||||| || || | Sbjct 1497277 GCAAGCAGATGATCCAGGATATCATTACTGATGCCGTCACCATTGAGCAGGAGTTCCTCA 1497218 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 |||| ||| | ||| | | || |||||||||| | || || ||| |||||| |||| Sbjct 1497217 CTGAGGCTCTTCCCTGCGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTG 1497158 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 | || || || || ||||| | |||| | || | || | | || || | | | Sbjct 1497157 AGTTCGTCGCTGATCGTCTCCTTGTCGCGCTTGGCAACGAGAAGGTTTACAAGGCCACCA 1497098 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 |||| || || |||||||| | || || || | ||||||||| || || |||||||| | Sbjct 1497097 ACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGC 1497038 Query 61916 GTGTAGGCGACTATCA 61931 |||| | |||||| || Sbjct 1497037 GTGTTGCCGACTACCA 1497022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397556109486560