Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002234195.1_ 202017-07-27] 3,146 sequences; 56,132,059 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3136 279 8e-73 seq380 122 1e-25 seq80 73.4 6e-11 >seq3136 Length=7877 Score = 279 bits (308), Expect = 8e-73 Identities = 202/229 (88%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 7136 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 7079 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | |||||| Sbjct 7078 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 7019 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||||||| |||| ||||| || |||| || | | ||||||||||||||||||| Sbjct 7018 ACCCGGACCTTTCGGACAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 6961 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6960 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 6912 >seq380 Length=1607400 Score = 122 bits (134), Expect = 1e-25 Identities = 121/152 (80%), Gaps = 5/152 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||| |||||||| ||||| | |||| || |||| |||||||||||| ||| | Sbjct 1057387 GTACAAAGGGAAGGGACGTGATCAACACAAGCT-GACGACTTGCGCTTACTAGGGATTGC 1057445 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||||||| ||| | ||| ||| ||||||| || ||||| | | ||| | |||||| Sbjct 1057446 -TCGTTGAAGAGCAATAGTTGAAATACTCTATCCACAGCACGACGGAGTTTAACAAGATT 1057504 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCG 151 || ||||||| |||| ||| ||| | ||||| Sbjct 1057505 ACTCGGACCTCTCGGACAA--TGAAACACTCG 1057534 >seq80 Length=69143 Score = 73.4 bits (80), Expect = 6e-11 Identities = 58/70 (83%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 159 CATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218 |||| || |||||| | | ||||||| | |||||||||||||| ||||| ||| ||||| Sbjct 34641 CATCCGTCTAGCGCACATACGGCCCACAGCATCTAAGGGCATCGCAGACATGTCCTTGCC 34582 Query 219 TCAAACTTCC 228 || ||||||| Sbjct 34581 TCCAACTTCC 34572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751977081390