Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002234195.1_ 202017-07-27] 3,146 sequences; 56,132,059 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2959 361 4e-95 seq1147 203 3e-47 >seq2959 Length=1076507 Score = 361 bits (400), Expect = 4e-95 Identities = 1225/1880 (65%), Gaps = 50/1880 (3%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| || | | |||||| |||| || | ||| ||||||||||| || Sbjct 631427 ATCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCAGT 631368 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGC 65194 ||||||||| ||| || | ||| ||||| || | || |||| | | || Sbjct 631367 TTTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATAC-TGGTGATCTTGCCCATCGTGGGG 631310 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || |||| ||||| |||||| ||| | ||| ||||| |||||| Sbjct 631309 TCCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCC 631250 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | || || | || || |||||||| |||||||| ||||| | | | || || Sbjct 631249 ATCTGAACGACTTGGCGCTGAGAGATCTCCCAAACGGTCTTATACAGA-GCCTTGACATC 631191 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 || || | ||||| ||| | |||||| ||||| ||||| || ||| Sbjct 631190 GGCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCAT 631131 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431 | || ||||||| ||||| |||| ||| | |||| | || | | |||| || Sbjct 631130 AGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC--AGCCAGGGGTTGACAACC 631073 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||||| || | || ||||| || ||||||||||| ||| ||| || ||| | Sbjct 631072 TGGAACTCACCAGCGAGAACACGTCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCAC 631013 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| ||||| |||| ||| ||||| ||||| ||||| | | || | Sbjct 631012 TCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTG 630953 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACATCGGTTT 65610 || || | |||| | | | | | || | | || ||||||| ||| | | | Sbjct 630952 TTACGGATGCCGTGTGTCTTGACTTCCTCTCGAAGAGTC-TCCCAGTCCCAGA---GGTC 630897 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 | | | | | ||| |||||| || || ||| | || | ||| || ||||| Sbjct 630896 AGAG--GGCTTG-ACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGGGAACC 630840 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730 ||| | ||| ||||||||||| || || || | || ||| || || Sbjct 630839 TTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAGGCAGTGAGGGCAGC 630780 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGG 65790 |||||||||||||| || | || || ||||| ||||| |||| | || Sbjct 630779 GTGGTAAATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGG 630720 Query 65791 CATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 ||| | || | |||| ||||| || || ||||| |||| ||| ||||| || || Sbjct 630719 CATGCGCAGAGCAAGGAAAGCATCGGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTG 630660 Query 65851 ACGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 |||| || | || || |||| | |||||||||| || | |||||| || Sbjct 630659 GCGCATGTT--ACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTG 630602 Query 65909 TTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTA 65968 |||| || || | || || || || |||| | | ||| || || Sbjct 630601 TTCAGGTTACGAATAACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCG-------TA 630549 Query 65969 GGACG----ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTT 66024 | | | |||| || | | | | ||| || || ||||| || ||||| Sbjct 630548 GCAAGCCTCATCGTAGTTGATGAA------AGA---GGGCAGAGCCAGAGAGGCAAGGTT 630498 Query 66025 GCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCA 66084 ||||||||| | ||||||||| || ||||| | |||||| |||||||| || || Sbjct 630497 GCAGACAGCGACCTCGTCAGGGGCACAGTACTCAATAATTTCAGTGCACAGGTTGGAGCT 630438 Query 66085 GCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCAT 66144 || ||||| || | |||| ||| || |||||||| ||||| ||||||||||| | ||| Sbjct 630437 TCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCAT 630378 Query 66145 GTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTT 66204 | | || | ||||||||| |||| ||||| ||||||| |||||| | ||||| Sbjct 630377 GAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCCTT 630318 Query 66205 CACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATT 66263 | || | | | |||| | | | | ||||| | |||||| || ||||| | Sbjct 630317 GATAGT-CTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCT 630259 Query 66264 CACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCAT 66323 | || | |||| || | || |||| || || |||||||||| ||| || || | Sbjct 630258 CTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGCGTCCAGTCGCCGT 630199 Query 66324 CCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG 66383 || ||| ||||| ||| || |||||||| ||||| |||||| ||| || || || | Sbjct 630198 TCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCGAGGAAAAGGTCACGGG 630139 Query 66384 CTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCAT 66443 | || |||||| | ||||| || || || | || |||||||| |||| || | | Sbjct 630138 CACGGACCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGT 630079 Query 66444 GCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGT 66503 |||| || || ||||||||||| || | || || ||| |||||| |||||||| | Sbjct 630078 GCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACAT 630019 Query 66504 AGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGG 66563 ||||||| |||||||||||||| | ||| || || | ||||| ||| | || |||| Sbjct 630018 AGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCGTTCGATGTACCGTTGG 629959 Query 66564 TGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGG 66623 | ||| ||||| ||| || || || ||| ||| || ||||||||||||||||| | Sbjct 629958 TACCGGCGATGTAGGAGCCAGTAGCACGGATACGGTGCACGTTCAGACCAATACCACCAG 629899 Query 66624 CCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTC 66681 || |||| ||||| ||||| || | | | || | | || || ||||| ||| Sbjct 629898 CCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC--GTAGATTCCCTCAATACTGTC 629841 Query 66682 ACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAA 66741 |||| || | | | |||| || | |||||| | || ||| |||| ||| Sbjct 629840 GTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCGTTGAA 629781 Query 66742 GAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGAC 66801 ||| ||||| | || || || ||| | | || ||||| ||||| ||||| | ||| Sbjct 629780 GAGCGTGGGAGAGGCATGTGTGAAGAATTTGCTGGACATCAGGTTGTATGTCTCCAAGAC 629721 Query 66802 AGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCC 66860 || || | || || ||| || | | |||| ||||| | | || ||||| | Sbjct 629720 TCGCTCGATATCATCACCCCAAATACCAACAGACACA-CGCATGATCATGTGCTGAGGGC 629662 Query 66861 GTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAA 66920 | ||||| | | | | | || | | | ||| || || |||| ||||||| |||| Sbjct 629661 GCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAA 629602 Query 66921 AGTACGAGTAATTGAAATCG 66940 |||| ||| | ||||||| Sbjct 629601 AGTATTGGTATTGGAAATCG 629582 >seq1147 Length=1368141 Score = 203 bits (224), Expect = 3e-47 Identities = 564/856 (66%), Gaps = 22/856 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || |||||||||||||| | |||||| | ||| | Sbjct 1256900 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTT 1256841 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | |||||||| | || | | || ||| || ||| | Sbjct 1256840 TCCAAGGATCTCCATGACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCT 1256781 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || || ||||| ||||| ||||| | | || || Sbjct 1256780 CACATCCTTGCTTTCTTCGCTGCGTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCGA 1256721 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| ||||| || | | ||||| ||||| ||||||||||||||||| ||| Sbjct 1256720 TTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATG 1256661 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| ||||||| |||| ||| | ||||| || || ||||| | ||||| || Sbjct 1256660 GAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGACACCTACATAAAGGAGCCCGCC 1256601 Query 61384 GAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG---- 61438 | || | | | | || || ||||| ||||| || || || | | ||||| Sbjct 1256600 CAGCGA-ACCTACCTCTTTAACGCCATTGAGACCATCCCC----TGCATCCGAAAGAAGG 1256546 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA--TTTGGTGAACGATTGCT 61496 | || |||||| || |||||| ||| | || | || | |||| | || | | Sbjct 1256545 CCGACTGGGCCATCCGATGGATC--CAGGATAAGGACTCCTCCTTTGCCCAGCGTCTCGT 1256488 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || || || | || |||||| | || |||||||| | || ||| | ||||| ||| | Sbjct 1256487 TGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCT 1256428 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| ||||| || |||||||||||||||||| ||| ||| | || || || || || Sbjct 1256427 CAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGA 1256368 Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCCGT 61675 ||| | || ||| ||||| | || || || || | || | |||| | Sbjct 1256367 GGGTCTTCACACTGACTTTGC---CTGCCTCCTC-CACTCTCACCTCAAGGGTCGTGCCA 1256312 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 || || | || || || ||| || || || || || ||||| || || | Sbjct 1256311 GCAAGCAGATGATCCAGGATATCATTACTGATGCCGTCACCATTGAGCAGGAGTTCCTCA 1256252 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 |||| ||| | ||| | || |||||||||| | || || ||| |||||| |||| Sbjct 1256251 CTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTG 1256192 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 | || || || || ||||| | |||| | || | || | | || || | | | Sbjct 1256191 AGTTCGTCGCTGATCGTCTCCTTGTCGCGCTTGGCAACGAGAAGGTTTACAAGGCCACCA 1256132 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 |||| || || |||||||| | || || || | ||||||||| || || |||||||| | Sbjct 1256131 ACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGC 1256072 Query 61916 GTGTAGGCGACTATCA 61931 |||| | |||||| || Sbjct 1256071 GTGTTGCCGACTACCA 1256056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397552756497440