Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq1393 279 8e-73
>seq1393
Length=7547
Score = 279 bits (308), Expect = 8e-73
Identities = 202/229 (88%), Gaps = 5/229 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 672 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 615
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | ||||||
Sbjct 614 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 555
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||||||| |||| ||||| || |||| || | | |||||||||||||||||||
Sbjct 554 ACCCGGACCTTTCGGACAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 497
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751988118165
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |