Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1393 381 1e-103 >seq1393 Length=7547 Score = 381 bits (422), Expect = 1e-103 Identities = 233/246 (95%), Gaps = 1/246 (0%) Strand=Plus/Plus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132 ||||||| |||||||||||||||| || | |||||||| ||||||||||||||||||||| Sbjct 7301 TTTTACTGTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACATTAGCATGG 7360 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 7361 AATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 7420 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 7421 ATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 7480 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||| Sbjct 7481 AAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GAACGAAAGT 7539 Query 313 TAGGGG 318 |||||| Sbjct 7540 TAGGGG 7545 Score = 84.2 bits (92), Expect = 4e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGG 63 |||||||||||||||||||| |||| ||| || |||||||||||||||||||| ||||| Sbjct 7192 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATGCCCTTCACTGGGTGTGGCGGGG 7250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915185073088