Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1393 381 1e-103
>seq1393
Length=7547
Score = 381 bits (422), Expect = 1e-103
Identities = 233/246 (95%), Gaps = 1/246 (0%)
Strand=Plus/Plus
Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132
||||||| |||||||||||||||| || | |||||||| |||||||||||||||||||||
Sbjct 7301 TTTTACTGTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACATTAGCATGG 7360
Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 7361 AATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 7420
Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252
||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 7421 ATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 7480
Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||
Sbjct 7481 AAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GAACGAAAGT 7539
Query 313 TAGGGG 318
||||||
Sbjct 7540 TAGGGG 7545
Score = 84.2 bits (92), Expect = 4e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGG 63
|||||||||||||||||||| |||| ||| || |||||||||||||||||||| |||||
Sbjct 7192 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATGCCCTTCACTGGGTGTGGCGGGG 7250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915185073088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |