Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1393 704 0.0
>seq1393
Length=7547
Score = 704 bits (780), Expect = 0.0
Identities = 559/663 (84%), Gaps = 10/663 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 1553 TGTAAAGCTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 1612
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1613 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 1672
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 1673 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTT 1732
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
|||||||||| | ||| ||| | || ||| || ||||||| ||| |
Sbjct 1733 ATGACCAGACTTGGACTTGGTTAATCATCTGGGGTTCTC-CCCAGTGCACTTTTC-CAGT 1790
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
||||||||||||||| | | | |||||||||| |||||||||||| | |||||||
Sbjct 1791 TCAGGCCAGCATCAGTTTTCCCCGGGGGATAAAGGCGGCGGGAATGTGGCTCTCTTCGGG 1850
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381
| ||||||||||||| ||| ||| | | | |||||||||| ||||| | || ||
Sbjct 1851 GAGTGTTATAGCCCGCCGTGTAATAC-CCTGGGGGGGACTGAGGTTCGCGCATCTGCAAG 1909
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
||||||||||||||||| | | || ||||||||| |||||||||||||||||| | |
Sbjct 1910 GATGCTGGCGTAATGGTCATCAACGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCTT 1968
Query 442 C-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500
| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| ||
Sbjct 1969 CGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA- 2027
Query 501 CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560
| || ||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2028 ---GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCAT 2084
Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620
| | |||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 2085 ACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACT 2144
Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||
Sbjct 2145 CTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGG 2204
Query 681 CGA 683
|||
Sbjct 2205 CGA 2207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079965015050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |