Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1383 80.6 6e-13 >seq1383 Length=49498 Score = 80.6 bits (88), Expect = 6e-13 Identities = 106/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 35152 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 35093 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 35092 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 35034 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 |||| ||||||| || || |||| || Sbjct 35033 GTTAAGGCCGCCTTTAACCGGGGTTT 35008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062382672256