Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq1393 616 5e-174
>seq1393
Length=7547
Score = 616 bits (682), Expect = 5e-174
Identities = 447/531 (84%), Gaps = 28/531 (5%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7035 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTNNNN 6976
Query 61 CCCCGTGTCGGGATTGGGT---------------------------AATTTGCGCGCCTG 93
||||||||||||||
Sbjct 6975 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTGCGCGCCTG 6916
Query 94 CTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAAT 153
||||||||||||||||| |||||||||||||||||||| ||||||| |||| ||||||
Sbjct 6915 CTGCCTTCCTTGGATGTAGTAGCCGTTTCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAAC 6856
Query 154 TCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGC 213
| ||||||||||||| |||||| | ||||| || || | ||||||||||||||||||
Sbjct 6855 CCTCCGTTACCCGTTGCAACCATGTTTGGCCAATACCCAAACATCGAAAGTTGATAGGGA 6796
Query 214 AGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAAT 273
|||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||
Sbjct 6795 AGAAATTTGAATGAACCATCGCCGGCACAAGGCCATGCGATTCGAGGAGTTATCATGAAT 6736
Query 274 CACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTC 333
||||| |||||||||||||| ||||||||| |||||||||||||| |||||||||||||
Sbjct 6735 CACCAGTGAGCCCCGAAGGGCATTGGTTTTTAATCTAATAAATACATCCCTTCCGAAGTC 6676
Query 334 GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTA 393
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 6675 GGGATTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAAGTAGTAAGGTACTA 6616
Query 394 TCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTAT 453
||||||||||||||||| || ||||||||||||||||||||| | ||||| |||||||||
Sbjct 6615 TCAAATAAACGATAACTTATATAATGAGCCATTCGCAGTTTCGCGGTATA-ATTGCTTAT 6557
Query 454 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6556 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 6506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510375365376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |