Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1393 616 5e-174 >seq1393 Length=7547 Score = 616 bits (682), Expect = 5e-174 Identities = 447/531 (84%), Gaps = 28/531 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7035 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTNNNN 6976 Query 61 CCCCGTGTCGGGATTGGGT---------------------------AATTTGCGCGCCTG 93 |||||||||||||| Sbjct 6975 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTGCGCGCCTG 6916 Query 94 CTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAAT 153 ||||||||||||||||| |||||||||||||||||||| ||||||| |||| |||||| Sbjct 6915 CTGCCTTCCTTGGATGTAGTAGCCGTTTCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAAC 6856 Query 154 TCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGC 213 | ||||||||||||| |||||| | ||||| || || | |||||||||||||||||| Sbjct 6855 CCTCCGTTACCCGTTGCAACCATGTTTGGCCAATACCCAAACATCGAAAGTTGATAGGGA 6796 Query 214 AGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAAT 273 |||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| Sbjct 6795 AGAAATTTGAATGAACCATCGCCGGCACAAGGCCATGCGATTCGAGGAGTTATCATGAAT 6736 Query 274 CACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTC 333 ||||| |||||||||||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct 6735 CACCAGTGAGCCCCGAAGGGCATTGGTTTTTAATCTAATAAATACATCCCTTCCGAAGTC 6676 Query 334 GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTA 393 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 6675 GGGATTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAAGTAGTAAGGTACTA 6616 Query 394 TCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTAT 453 ||||||||||||||||| || ||||||||||||||||||||| | ||||| ||||||||| Sbjct 6615 TCAAATAAACGATAACTTATATAATGAGCCATTCGCAGTTTCGCGGTATA-ATTGCTTAT 6557 Query 454 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6556 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 6506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510375365376