Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F002234085.
1_202017-07-27] 1,726 sequences; 52,309,290 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq480 695 0.0
seq852 82.4 3e-13
>seq480
Length=7900
Score = 695 bits (770), Expect = 0.0
Identities = 558/664 (84%), Gaps = 12/664 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| ||| |||||| ||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 733 TGTAAAGTTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 792
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 793 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 852
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 853 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTT 912
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
|||||||||| | ||| ||| | || ||| || ||||||| ||| | |
Sbjct 913 ATGACCAGACTTGGGCTTGGTTAATCATCTGGGGTTCTC-CCCAGTGCACTTTTC--CAG 969
Query 262 T-CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320
| |||||||||||||| | | | |||||||||| |||||||||||| | ||||||
Sbjct 970 TCCAGGCCAGCATCAGTTTTCCCCGGGGGATAAAGGCGGCGGGAATGTGGCTCTCTTCGG 1029
Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTA 380
|| |||||||||||| ||| ||| | | | |||||||||| ||||| | || |
Sbjct 1030 GGAGTGTTATAGCCCACCGTGTAATAC-CCTGGGGGGGACTGAGGTTCGCGCATCTGCAA 1088
Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440
|||||||||||||||||| | | || ||||||||| |||||||||||||||||| |
Sbjct 1089 GGATGCTGGCGTAATGGTCATCAACGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCT 1147
Query 441 TC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
|| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| ||
Sbjct 1148 TCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA 1207
Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559
| || ||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1208 ----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCA 1263
Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619
|| | |||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 1264 TACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAAC 1323
Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
|||||||||||||||||||||||||| ||||||||||||||||||||| |||| || |||
Sbjct 1324 TCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGG 1383
Query 680 GCGA 683
||||
Sbjct 1384 GCGA 1387
>seq852
Length=97056
Score = 82.4 bits (90), Expect = 3e-13
Identities = 102/138 (74%), Gaps = 5/138 (4%)
Strand=Plus/Plus
Query 458 GTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCA 517
|||||||| | | ||||||||||||||||||| ||||||| | | | || ||
Sbjct 37398 GTGTCAAAACTATCCGCGTAATGAAAGTGAACGTGGGTGGGAGC----GTCGACACATCA 37453
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
| ||||||||||| | |||||||||||||||||| |||||| | || ||| ||
Sbjct 37454 TTAGCCGATCCTGATATTCTCGGATGGATTTGAGTAAAAGCATACAAGGCCGG-CCCTAA 37512
Query 578 AGATGGTGAACTATGCCT 595
|| |||||| |||| ||
Sbjct 37513 AGCAGGTGAAATATGACT 37530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079962977300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |