Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F002234085. 1_202017-07-27] 1,726 sequences; 52,309,290 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq480 695 0.0 seq852 82.4 3e-13 >seq480 Length=7900 Score = 695 bits (770), Expect = 0.0 Identities = 558/664 (84%), Gaps = 12/664 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| |||||| ||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 733 TGTAAAGTTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 792 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 793 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 852 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || Sbjct 853 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTT 912 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCGG 261 |||||||||| | ||| ||| | || ||| || ||||||| ||| | | Sbjct 913 ATGACCAGACTTGGGCTTGGTTAATCATCTGGGGTTCTC-CCCAGTGCACTTTTC--CAG 969 Query 262 T-CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320 | |||||||||||||| | | | |||||||||| |||||||||||| | |||||| Sbjct 970 TCCAGGCCAGCATCAGTTTTCCCCGGGGGATAAAGGCGGCGGGAATGTGGCTCTCTTCGG 1029 Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTA 380 || |||||||||||| ||| ||| | | | |||||||||| ||||| | || | Sbjct 1030 GGAGTGTTATAGCCCACCGTGTAATAC-CCTGGGGGGGACTGAGGTTCGCGCATCTGCAA 1088 Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 |||||||||||||||||| | | || ||||||||| |||||||||||||||||| | Sbjct 1089 GGATGCTGGCGTAATGGTCATCAACGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCT 1147 Query 441 TC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499 || |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| || Sbjct 1148 TCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA 1207 Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559 | || ||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1208 ----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCA 1263 Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619 || | |||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct 1264 TACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAAC 1323 Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 |||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||| Sbjct 1324 TCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGG 1383 Query 680 GCGA 683 |||| Sbjct 1384 GCGA 1387 >seq852 Length=97056 Score = 82.4 bits (90), Expect = 3e-13 Identities = 102/138 (74%), Gaps = 5/138 (4%) Strand=Plus/Plus Query 458 GTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCA 517 |||||||| | | ||||||||||||||||||| ||||||| | | | || || Sbjct 37398 GTGTCAAAACTATCCGCGTAATGAAAGTGAACGTGGGTGGGAGC----GTCGACACATCA 37453 Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 | ||||||||||| | |||||||||||||||||| |||||| | || ||| || Sbjct 37454 TTAGCCGATCCTGATATTCTCGGATGGATTTGAGTAAAAGCATACAAGGCCGG-CCCTAA 37512 Query 578 AGATGGTGAACTATGCCT 595 || |||||| |||| || Sbjct 37513 AGCAGGTGAAATATGACT 37530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079962977300