Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F002234085.
1_202017-07-27] 1,726 sequences; 52,309,290 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq480 443 4e-122
seq80 152 1e-34
>seq480
Length=7900
Score = 443 bits (490), Expect = 4e-122
Identities = 284/309 (92%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||| ||||||||||
Sbjct 7460 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 7519
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7520 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 7579
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||
Sbjct 7580 GATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTACTT--CCTTGTCCG 7637
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 7638 AAAGGTCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 7697
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 7698 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 7757
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 7758 CCCTTTGTA 7766
>seq80
Length=2348490
Score = 152 bits (168), Expect = 1e-34
Identities = 110/127 (87%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 202 AGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCT 261
||||| ||||||||||||||||||| | ||||||| |||||||| ||| ||| |||||||
Sbjct 115249 AGGTCCGGGTAATCTTGTTAAACTCCGCCGTGCTGTGGATAGAGTATTTCAACTATTGCT 115308
Query 262 CTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCC 321
|||||||||| ||| |||||||||||| || ||||| | ||||||||||||||| ||
Sbjct 115309 CTTCAACGAGCAATCCCTAGTAAGCGCAAGTTGTCAGCTTGTGTTGATTACGTCCCTTCC 115368
Query 322 CTTTGTA 328
|||||||
Sbjct 115369 CTTTGTA 115375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947183651328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |