Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F002234085. 1_202017-07-27] 1,726 sequences; 52,309,290 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq888 122 3e-22 >seq888 Length=322282 Score = 122 bits (134), Expect = 3e-22 Identities = 217/314 (69%), Gaps = 2/314 (1%) Strand=Plus/Minus Query 12733 AACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACC 12792 ||||||||| ||| || ||||| || | | ||| || ||||| || | ||||||||| Sbjct 270815 AACATCGTAGTAGATGACGTTCATACCCATAGCCTCAGCGAGGACGGACAGCTGAGAACC 270756 Query 12793 AATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGA 12852 ||||| ||| || || || ||||| || ||||| |||| || || | || || | ||| Sbjct 270755 AATGTGACCGTAGCCAACGATACCCAGAGTCTTGCCTCGAATCTCCCAGC-ACTTGGAGC 270697 Query 12853 AG-TCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAA 12911 | ||||||||| ||||| |||| | || ||| || ||| |||| |||||| | || Sbjct 270696 TGACCTTGTTCCAGGTGCCTCGGTGCATCTCGTTGGATCGATCGCCAAGCTGACGGGCAA 270637 Query 12912 GATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAAT 12971 || || | | | |||| ||||| || || || | | |||| ||||| || | Sbjct 270636 GAACGATGATCTCGGCGATGACCAGCTCAGCGACACTGCGCGAGTTGGCGAAGGGGGAGT 270577 Query 12972 TAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGC 13031 | ||||| ||||| || |||| || | || || | ||||| | | ||||| | Sbjct 270576 TGAAGACGGCAATACCATTCTTGGCGGCGAACTCAAGGTCGACCTGGTTGGTGCCAATAC 270517 Query 13032 AGAAGCATCCTATG 13045 ||||||| || ||| Sbjct 270516 AGAAGCAGCCGATG 270503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884844716915318