Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20phaseoli_20[genbank_20GCA_5F001680515.1_202016-07-06]
16,072 sequences; 50,534,409 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1 731 0.0
seq2036 80.6 1e-12
>seq1
Length=9231
Score = 731 bits (810), Expect = 0.0
Identities = 565/663 (85%), Gaps = 10/663 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 4142 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 4201
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 4202 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 4261
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 4262 TGAAAAGAACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 4321
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
| |||||||||| | |||| ||| || || ||| | |||||||||||| | |
Sbjct 4322 GTGACCAGACTTGGGCTTGGTTGATCATCCAGGGTTCTC-CCTGGTGCACTCTTCCG-GC 4379
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||||||||||| | | | | |||||||||| |||||||||||| |||| ||||
Sbjct 4380 CCAGGCCAGCATCAGTTTGCCCCGGGGGATAAAGGCGTCGGGAATGTGGCTCCCTCCGGG 4439
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381
| |||||||||||||| | | ||| | | | |||||||||| ||||| || ||
Sbjct 4440 GAGTGTTATAGCCCGGCGCGCAATACCCTGAGGC-GGACTGAGGTTCGCGCATTCGCAAG 4498
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
||||||||||||||||| | || | ||||||||| |||||||||||||||||| | |
Sbjct 4499 GATGCTGGCGTAATGGTCATCAGTGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCTT 4557
Query 442 C-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500
| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| ||
Sbjct 4558 CGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA- 4616
Query 501 CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560
| || ||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 4617 ---GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAGTAAGAGCAT 4673
Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620
| | |||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 4674 ACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACT 4733
Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||
Sbjct 4734 CTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGG 4793
Query 681 CGA 683
|||
Sbjct 4794 CGA 4796
>seq2036
Length=7764
Score = 80.6 bits (88), Expect = 1e-12
Identities = 82/105 (78%), Gaps = 3/105 (3%)
Strand=Plus/Plus
Query 245 GGTGCACTCTTCTGCGGTC-AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGG 303
||||| |||||| ||||| ||||||||||||| | | | | ||||||| | ||||
Sbjct 137 GGTGCGCTCTTC--CGGTCCAGGCCAGCATCAGTTTGCCCCGGGGGATAAAAACGTCGGG 194
Query 304 AATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCG 348
|||||||| |||| ||||| ||||||||||| | ||| ||| ||
Sbjct 195 AATGTGGCTCCCTCCGGGGAGTGTTATAGCCTAGCGTGTAATACG 239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079655255600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |