Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20phaseoli_20[genbank_20GCA_5F001680515.1_202016-07-06]
16,072 sequences; 50,534,409 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1 253 3e-65
seq12826 123 4e-26
>seq1
Length=9231
Score = 253 bits (280), Expect = 3e-65
Identities = 178/199 (89%), Gaps = 3/199 (2%)
Strand=Plus/Minus
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||
Sbjct 2618 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 2560
Query 121 CACCAACCATAGTCGATGGGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| ||| || | || || |||||||| |||||||||||||||||||||||| ||||
Sbjct 2559 GTACTGCCAAAG-CAATACGGACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATT 2501
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 2500 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 2441
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 2440 AAAGAGCTCTCAATCTGTC 2422
Score = 104 bits (114), Expect = 4e-20
Identities = 59/60 (98%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3110 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 3051
>seq12826
Length=257
Score = 123 bits (136), Expect = 4e-26
Identities = 76/81 (94%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62
|||| || | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 169 CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 228
Query 63 CTGTTATTGCCTCAAACTTCC 83
|||||||||||||||||||||
Sbjct 229 CTGTTATTGCCTCAAACTTCC 249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796675940232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |