Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20phaseoli_20[genbank_20GCA_5F001680515.1_202016-07-06]
16,072 sequences; 50,534,409 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq1 342 9e-92
seq237 122 1e-25
>seq1
Length=9231
Score = 342 bits (378), Expect = 9e-92
Identities = 200/206 (97%), Gaps = 1/206 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 8697 TACTAAGCTGAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 8639
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8638 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 8579
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 8578 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 8519
Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||| ||||||||||||||
Sbjct 8518 GAACGCTTGGCCGCCACAAGCCAGTT 8493
Score = 159 bits (176), Expect = 6e-37
Identities = 93/95 (98%), Gaps = 1/95 (1%)
Strand=Plus/Minus
Query 202 CAGTT-ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAG 260
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 8110 CAGTTCATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAG 8051
Query 261 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||
Sbjct 8050 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 8016
>seq237
Length=13594
Score = 122 bits (134), Expect = 1e-25
Identities = 82/91 (90%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA--GGGACTAAAGGATC 264
|||||||||||||||||||||||||||||||||| | || | | ||||||||||||||
Sbjct 2032 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTGAGATGTTGCCGGGGACTAAAGGATC 2091
Query 265 GATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||| |||||||||||||||||| |||||||
Sbjct 2092 GATAAGCCACACTTTCATGGTTTATATTCAC 2122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854262680832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |