Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20phaseoli_20[genbank_20GCA_5F001680515.1_202016-07-06] 16,072 sequences; 50,534,409 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1 297 4e-78 seq12826 282 8e-74 >seq1 Length=9231 Score = 297 bits (328), Expect = 4e-78 Identities = 188/203 (93%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185 |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 3051 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTA 3110 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 | || |||||||| |||| | ||||||||||||||||||| |||||||||||||||||| Sbjct 3111 CCTC--CTTGGCCGAAAGGCCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAG 3168 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 |||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| Sbjct 3169 CATTGCAATTATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGT 3228 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||||| Sbjct 3229 TGATTACGTCCCTGCCCTTTGTA 3251 Score = 138 bits (152), Expect = 2e-30 Identities = 94/106 (89%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| | | |||||||| | ||| |||||||||| Sbjct 2513 GAACGAGACCTTAACCTACTAAATAGTCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 2572 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2573 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 2618 >seq12826 Length=257 Score = 282 bits (312), Expect = 8e-74 Identities = 199/226 (88%), Gaps = 1/226 (0%) Strand=Plus/Minus Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 249 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 190 Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222 |||||||| | ||||||| | || ||||||||| ||| | |||||||||| | || Sbjct 189 TACACTGATGTATTCAACGAGCTTATAGCCTTGGCCGACAGGCCCGGGTAATCTT-TGAA 131 Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282 | | ||||| |||||||||| |||||||||| ||| ||||||||||||||| |||||| Sbjct 130 ATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGT 71 Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||| ||||||||| |||||||| ||||||||||||||||||| Sbjct 70 AAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTA 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947047766016