Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq119 167 1e-39
seq76 167 1e-39
seq79 122 5e-26
>seq119
Length=639
Score = 167 bits (184), Expect = 1e-39
Identities = 108/117 (92%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| || ||||||| |||||| |||||
Sbjct 485 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGCCC 543
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 544 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 600
>seq76
Length=8430
Score = 167 bits (184), Expect = 1e-39
Identities = 108/117 (92%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| |||||||||||||| |||||||||| |||||||||| ||||||||| ||
Sbjct 5290 GAGCCCAAGCACTTTGATTTCTCGAAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTCC 5348
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 5349 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 5405
>seq79
Length=7387
Score = 122 bits (134), Expect = 5e-26
Identities = 97/117 (83%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||| |||||||| | ||||| | |||||| ||
Sbjct 5239 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGGCGGAGTCCTTAAAGCAACATCCGCC 5298
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||| |||||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct 5299 AATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 5355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278399600670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |