Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq119 167 1e-39 seq76 167 1e-39 seq79 122 5e-26 >seq119 Length=639 Score = 167 bits (184), Expect = 1e-39 Identities = 108/117 (92%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| || ||||||| |||||| ||||| Sbjct 485 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGCCC 543 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 544 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 600 >seq76 Length=8430 Score = 167 bits (184), Expect = 1e-39 Identities = 108/117 (92%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| |||||||||||||| |||||||||| |||||||||| ||||||||| || Sbjct 5290 GAGCCCAAGCACTTTGATTTCTCGAAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTCC 5348 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 5349 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 5405 >seq79 Length=7387 Score = 122 bits (134), Expect = 5e-26 Identities = 97/117 (83%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||| | ||||| | |||||| || Sbjct 5239 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGGCGGAGTCCTTAAAGCAACATCCGCC 5298 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 5299 AATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 5355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399600670