Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq76 428 8e-118
seq79 235 1e-59
>seq76
Length=8430
Score = 428 bits (474), Expect = 8e-118
Identities = 284/314 (90%), Gaps = 1/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||||||||| |||||| |||| ||| ||||||||||||||||||||||| ||||||
Sbjct 5719 TGGTCCGGCCGGGTCTTTCCCTCTGTGGAACCGCATGCCCTTCACTGGGTGTGTCGGGGA 5660
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||||||||||||||||||| || | |||||||| ||||||||||
Sbjct 5659 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATAGTA 5600
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 5599 CAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 5540
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct 5539 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAGCTGTCAGAGGTGAAATTCTTGG 5480
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
|| | ||||||||||||||||||||||| || ||||||||||||||||| || || ||
Sbjct 5479 ATCTGCTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATAAG-GA 5421
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 5420 ACGAAAGTTAGGGG 5407
>seq79
Length=7387
Score = 235 bits (260), Expect = 1e-59
Identities = 245/316 (78%), Gaps = 8/316 (3%)
Strand=Plus/Minus
Query 9 CCGGCCGGGCCTTTCCTTCTG---GGGATCCGCA--TGCCCTTCACTGGGTGTGCCGGGG 63
|||| ||| | | ||||||| | ||| ||| || |||| ||||| | | || |
Sbjct 5670 CCGGTCGGCTCGTCCCTTCTGCCGGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGC 5611
Query 64 AGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATAC 122
|| | || |||||||||| ||||||||||| |||||||| |||| |||| | ||||
Sbjct 5610 CTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATAC 5551
Query 123 ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC 182
|||||||||| |||| |||||| | || | |||||||||||| | ||| ||
Sbjct 5550 ATTAGCATGGGATAACGTCATAGGATTT-CGATCCTATTTTGTTGGCCTTCGGGATCGGA 5492
Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242
||||||||||| ||||| ||||||||| | ||||| || ||||||||||||||||||
Sbjct 5491 GTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTT 5432
Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302
|||||||| ||||| ||| ||||||||||| || ||||||||||||||||||||||
Sbjct 5431 GGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-A 5373
Query 303 GAACGAAAGTTAGGGG 318
||||||||||| ||||
Sbjct 5372 GAACGAAAGTTGGGGG 5357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915198599744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |