Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq66 116 9e-24
>seq66
Length=34157
Score = 116 bits (128), Expect = 9e-24
Identities = 193/276 (70%), Gaps = 11/276 (4%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||| ||| || | ||||| ||||||| ||| | |||||||| ||||||
Sbjct 10062 GCATCTGCACTGCTAATTCAAGTTCACTGGGTCAATCTTAGAGACAGCTGTTGTATCGTT 10003
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
|| ||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| | |
Sbjct 10002 ACATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA 9943
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGAT---CAAGAGCTTCGC----GTTAGCTAA 185
|||| ||||||| || ||||||| ||| | || | ||| | | |||
Sbjct 9942 -CGTTAAGGCCGCCATTAACCGGGGGTTCCGTCTACACTAAATTCCCTAAAAAAATTTAA 9884
Query 186 CCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTG 245
||| |||||| |||||||||||||| | |||||| ||||| | | || |
Sbjct 9883 TTATATCTGTTAACCAGCCGGCACCGGGCAGACATCACACTTTATACTTTGATTTAAATC 9824
Query 246 TTT---GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
||| ||| ||||||||||||| | ||||||||||
Sbjct 9823 TTTGACGCAAAGTGCTGTGTTTTAATTAAACAGTCG 9788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260798070976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |