Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq119 100 2e-19 seq76 98.7 6e-19 seq79 75.2 7e-12 >seq119 Length=639 Score = 100 bits (110), Expect = 2e-19 Identities = 70/76 (92%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||| ||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 62 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGCGTGTACAAAGGGCAGGGACG 119 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 120 TAAT-CAACGCAAGCT 134 >seq76 Length=8430 Score = 98.7 bits (108), Expect = 6e-19 Identities = 72/80 (90%), Gaps = 3/80 (4%) Strand=Plus/Plus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||| |||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 4720 AGATCTCACTGAGCCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 4777 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||||||||| Sbjct 4778 GACGTAAT-CAACGCAAGCT 4796 >seq79 Length=7387 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 4681 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 4738 Query 122 GCT 124 ||| Sbjct 4739 GCT 4741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799568540