Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq119 100 2e-19
seq76 98.7 6e-19
seq79 75.2 7e-12
>seq119
Length=639
Score = 100 bits (110), Expect = 2e-19
Identities = 70/76 (92%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||| ||||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 62 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGCGTGTACAAAGGGCAGGGACG 119
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 120 TAAT-CAACGCAAGCT 134
>seq76
Length=8430
Score = 98.7 bits (108), Expect = 6e-19
Identities = 72/80 (90%), Gaps = 3/80 (4%)
Strand=Plus/Plus
Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104
|| ||||||| |||||| || ||||||||| ||||||||||| ||||||||||||||||
Sbjct 4720 AGATCTCACTGAGCCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 4777
Query 105 GACGTAATACAACGCAAGCT 124
|||||||| |||||||||||
Sbjct 4778 GACGTAAT-CAACGCAAGCT 4796
>seq79
Length=7387
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 4681 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 4738
Query 122 GCT 124
|||
Sbjct 4739 GCT 4741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300799568540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |