Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq76 140 4e-31 seq79 80.6 3e-13 >seq76 Length=8430 Score = 140 bits (154), Expect = 4e-31 Identities = 117/141 (83%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||| |||||| Sbjct 5549 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTGTACTATTCG 5608 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||| | || |||||||||||| |||| |||||||||||| |||| | || Sbjct 5609 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAGTCCTGTTTCCCCGACA 5668 Query 126 CA-CCAATGAA-GGCATACGG 144 || ||| |||| ||||| ||| Sbjct 5669 CACCCAGTGAAGGGCATGCGG 5689 >seq79 Length=7387 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||||||||||| || | |||||| |||| |||||||||||||| | | ||||| Sbjct 5506 CCAACAAAATAGGATCGAAA-TCCTATGACGTTATCCCATGCTAATGTATACAGAGCGTA 5564 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 5565 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 5602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199117802