Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq76 704 0.0 seq79 580 3e-163 >seq76 Length=8430 Score = 704 bits (780), Expect = 0.0 Identities = 461/504 (91%), Gaps = 3/504 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 5876 GTACTCATTCCGATTACAAGACCCATAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 5935 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| || Sbjct 5936 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAAAAGTGGTAGCCATT 5995 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||| |||| |||||| | ||||||||||||| |||||| | Sbjct 5996 TCTCAGGCTCCCTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTAACCATGCGA 6055 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 | || | | | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 6056 AGACAAGACCTTCGCATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 6115 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||||||||| || | |||||| ||| ||||| Sbjct 6116 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACC-AGAAAGCCCGAA-GGCATTGGT 6173 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 6174 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 6233 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| |||||||||| |||||||||||||||||||| || |||||| Sbjct 6234 AATTACCACGGTTATCCAAGTAGTAAGGTGCTATCAAATAAACGATAACTTATATAATGA 6293 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 6294 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 6352 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 6353 AGACAAGCATATGACTACTGGCAG 6376 >seq79 Length=7387 Score = 580 bits (642), Expect = 3e-163 Identities = 442/514 (86%), Gaps = 14/514 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | || |||||| |||| |||||||||||||||||| Sbjct 5825 GTACTCATTCCAATTACCAGACTCGAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 5883 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5884 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 5943 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||| Sbjct 5944 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATAGTA 6003 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct 6004 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCA 6063 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAGGGC--- 294 | | |||| |||||| ||| |||||| |||||||| || |||| | | || || Sbjct 6064 CGATGGCCGTGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCCG 6121 Query 295 -GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTTTTAGCATGTAT 351 || | ||||||||||||||| | ||||||| |||||||||||| | ||| |||| Sbjct 6122 TGTCGACCTTTTATCTAATAAATGCGTCCCTTCCAGAAAGTCGGGGTTTGTTGCACGTAT 6181 Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTG 411 ||||||||||||||| |||||||||| |||| || ||| |||||| |||| ||||||| Sbjct 6182 TAGCTCTAGAATTACTACGGTTATCCGAGTAG-CAGATACCATCAAACAAACTATAACTG 6240 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGC 470 |||||||||||||||||||||||||| || | ||| | | ||||||| ||||||||||| Sbjct 6241 ATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGC 6300 Query 471 TTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||| |||||||||||||||||||||||||||||| Sbjct 6301 TTAGTCTTTGAGACAAGCATATGACTACTGGCAG 6334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510397689088