Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq76 704 0.0
seq79 580 3e-163
>seq76
Length=8430
Score = 704 bits (780), Expect = 0.0
Identities = 461/504 (91%), Gaps = 3/504 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 5876 GTACTCATTCCGATTACAAGACCCATAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 5935
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||
Sbjct 5936 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAAAAGTGGTAGCCATT 5995
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 5996 TCTCAGGCTCCCTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTAACCATGCGA 6055
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
| || | | | |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 6056 AGACAAGACCTTCGCATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 6115
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||||||||||||||| || | |||||| ||| |||||
Sbjct 6116 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACC-AGAAAGCCCGAA-GGCATTGGT 6173
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 6174 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 6233
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| |||||||||| |||||||||||||||||||| || ||||||
Sbjct 6234 AATTACCACGGTTATCCAAGTAGTAAGGTGCTATCAAATAAACGATAACTTATATAATGA 6293
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 6294 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 6352
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 6353 AGACAAGCATATGACTACTGGCAG 6376
>seq79
Length=7387
Score = 580 bits (642), Expect = 3e-163
Identities = 442/514 (86%), Gaps = 14/514 (3%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| | || |||||| |||| ||||||||||||||||||
Sbjct 5825 GTACTCATTCCAATTACCAGACTCGAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 5883
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5884 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 5943
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| |||||| ||||| |||
Sbjct 5944 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATAGTA 6003
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||
Sbjct 6004 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCA 6063
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAGGGC--- 294
| | |||| |||||| ||| |||||| |||||||| || |||| | | || ||
Sbjct 6064 CGATGGCCGTGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCCG 6121
Query 295 -GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTTTTAGCATGTAT 351
|| | ||||||||||||||| | ||||||| |||||||||||| | ||| ||||
Sbjct 6122 TGTCGACCTTTTATCTAATAAATGCGTCCCTTCCAGAAAGTCGGGGTTTGTTGCACGTAT 6181
Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTG 411
||||||||||||||| |||||||||| |||| || ||| |||||| |||| |||||||
Sbjct 6182 TAGCTCTAGAATTACTACGGTTATCCGAGTAG-CAGATACCATCAAACAAACTATAACTG 6240
Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGC 470
|||||||||||||||||||||||||| || | ||| | | ||||||| |||||||||||
Sbjct 6241 ATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGC 6300
Query 471 TTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||| ||||||||||||||||||||||||||||||
Sbjct 6301 TTAGTCTTTGAGACAAGCATATGACTACTGGCAG 6334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510397689088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |