Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02] 153 sequences; 47,778,485 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5 383 1e-101 seq7 205 7e-48 >seq5 Length=2590615 Score = 383 bits (424), Expect = 1e-101 Identities = 1230/1881 (65%), Gaps = 52/1881 (3%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| || | | |||||| |||| || | ||| |||||||||||||| Sbjct 1617683 ATCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGT 1617742 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||||||| ||| || | ||| ||||| | || | || |||| | | || Sbjct 1617743 CTTGAGGCCAAGTTTCCA-GCCTGCAAAGTGCAT-GCTGGTGATCTTGCCCATCGTGGGG 1617800 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || |||| ||||| |||||| ||| | ||| ||||| |||||| Sbjct 1617801 TCCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCC 1617860 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GC---GACGTAC 65310 || | || || | || || ||||||||||| ||||||||||| || ||||| | Sbjct 1617861 ATCTGAACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACGT-C 1617919 Query 65311 CTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACG 65370 || || || | ||||| ||| | |||||| ||||| ||||| || Sbjct 1617920 GGCA---GGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTT 1617976 Query 65371 CATCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATG 65428 ||| | || ||||||| ||||| |||| ||| | |||| | || | | |||| Sbjct 1617977 CATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC--AGCCAGGGGTTGACA 1618034 Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 || |||||||| || | || ||||| || ||||| ||||| ||| ||| || ||| Sbjct 1618035 ACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAG 1618094 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 | || |||| || ||||| |||| ||| ||||| ||||| ||||| | | || Sbjct 1618095 CACTCGTTGTTACCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGA 1618154 Query 65549 GAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACATCGG 65607 ||| || | |||| | | | | | || | | || ||||||| ||| | || Sbjct 1618155 CTGTTACGGATGCCGTGTGTCTTGACTTCCTCTCGAAGAGTC-TCCCAGTCCCAGA--GG 1618211 Query 65608 TTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGA 65667 | | | | ||| |||||| || || ||| | || | ||| || || Sbjct 1618212 T----CAGAGGGTTTGACGTTCCACATGTCAAACTGGAGGATACCCTCAGAGGCGGGGGA 1618267 Query 65668 ACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGC 65727 ||| ||| | ||| ||||||||||| || || || | || ||| || Sbjct 1618268 ACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAGGCAGTGAGGGC 1618327 Query 65728 GGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTA 65787 || ||||||||||||||| || | || || ||||| ||||| |||| | Sbjct 1618328 AGCGTGATAAATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAA 1618387 Query 65788 CGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847 ||||||| || | |||| ||||| || || ||||| || | ||| ||||| || Sbjct 1618388 GGGCATACGCAGAGCAAGGAAAGCATCGGCGAGGCCCTGAACACCCAGACCAATGGGTCG 1618447 Query 65848 ATGACGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATCGATAATG 65905 || |||| || | || || |||| | |||||||||| || | |||||| || Sbjct 1618448 GTGGCGCATGTT--ACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATC 1618505 Query 65906 CGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAA--AT 65963 ||||| ||||| | || || || || |||| | | ||| || | | Sbjct 1618506 TTGTTCAAGTTGCGAATAACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCGTAGCAA 1618565 Query 65964 GTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGT 66023 | || |||| || | || ||| || | ||||| || |||| Sbjct 1618566 GCTTC-----ATCGTAGTTGATG---------AAGGAGGGCAGAGACAGAGAGGCAAGGT 1618611 Query 66024 TGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGC 66083 |||||||||| | |||||||||||| ||||||| |||||| ||||| || || || Sbjct 1618612 TGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGC 1618671 Query 66084 AGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCA 66143 || ||||| || | |||| ||| || |||||||| || || ||||||||||| | || Sbjct 1618672 TTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAGAGCA 1618731 Query 66144 TGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCT 66203 || | || | ||||||||| |||| ||| | ||||||| |||||| | |||| Sbjct 1618732 TGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAAAGCTTCTGAGCCT 1618791 Query 66204 TCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGAT 66262 | | || | | | |||| | | | | ||||| | |||||| || ||||| Sbjct 1618792 TGATTGT-CTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCC 1618850 Query 66263 TCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCA 66322 || || | |||| || | || |||| || ||||||||||| | ||| ||||| Sbjct 1618851 TCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCG 1618910 Query 66323 TCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGT 66382 | || ||| ||||| ||| || |||||||| ||||| |||||| ||| ||||| || Sbjct 1618911 TTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCGAGGAAAAGATCACGG 1618970 Query 66383 GCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442 || || |||||| | ||||| || || || | || ||||| || |||| || | Sbjct 1618971 GCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAAATCGAAGACATCAGAG 1619030 Query 66443 TGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACG 66502 ||||| || || ||||||||||| || | || || ||| |||||| |||||||| Sbjct 1619031 TGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACA 1619090 Query 66503 TAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTG 66562 || ||||| |||||||||||||| | ||| || || | || || ||| | || ||| Sbjct 1619091 TACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCATTCGATGTACCGTTG 1619150 Query 66563 GTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCG 66622 || ||| ||||| || || || || ||| ||| ||||| |||||||||||||| Sbjct 1619151 GTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGACCAATACCACCA 1619210 Query 66623 GCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGT 66680 ||| |||| ||||| ||||| || | | | || | | || || ||||| || Sbjct 1619211 GCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC--GTAGATTCCCTCAATACTGT 1619268 Query 66681 CACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGA 66740 | |||| || | | | |||| || | |||||| | || ||| |||| || Sbjct 1619269 CGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGA 1619328 Query 66741 AGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGA 66800 |||| ||||| | ||| ||||| ||| | | || |||||| |||||| ||||| | || Sbjct 1619329 AGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGATTGTATGTCTCCAAGA 1619388 Query 66801 CAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGC 66859 | || || | || || || || | | |||| ||||| | | || ||||| Sbjct 1619389 CTCGCTCGATATCATCACCCCAGATACCAACAGACACA-CGCATGATCATGTGCTGAGGG 1619447 Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919 || ||||| | | | | | || | | | ||| || || |||| ||||||| ||| Sbjct 1619448 CGCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCA 1619507 Query 66920 AAGTACGAGTAATTGAAATCG 66940 ||||| ||| | ||||||| Sbjct 1619508 AAGTATTGGTATTGGAAATCG 1619528 >seq7 Length=1585612 Score = 205 bits (226), Expect = 7e-48 Identities = 567/859 (66%), Gaps = 28/859 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || |||||||||||||| | |||||| | ||| | Sbjct 1400593 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 1400652 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || || | | ||| | || ||| || Sbjct 1400653 TCCAAGGATCTCCACGACTGGAACAACCGCCTAACT---GCTGATGAGCAGTTCTTTGTC 1400709 Query 61204 ---CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260 || | | || ||||| || || || || ||||||||||| ||||| | | || Sbjct 1400710 TCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAG 1400769 Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 || ||| ||||| || | | ||||| ||||| ||||||||||||||||| Sbjct 1400770 CGATTCAGTGGTGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGCTTCCAGATCATG 1400829 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 |||||||| | || || |||| ||| | || ||||| || ||||||| ||||| Sbjct 1400830 ATGGAGAACATTCATTCCGAGACCTACTCCCTCCTTATCGACACATACATCAAGGAGCCC 1400889 Query 61381 GCGGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA-- 61437 || | || | | || | ||||| ||||| ||||| || || || | | |||| Sbjct 1400890 GCCCAGCG-AACCTATCTCTTCAACGCCATTGAGACCATTCC----CTGCATCCGAAAGA 1400944 Query 61438 --GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATT 61493 || || |||||| || ||||| |||| | || | || | |||| | || | Sbjct 1400945 AGGCTGACTGGGCCATCCGATGGAT--CCAGGATAAGGACTCCTCCTTTGCCCAGCGTCT 1401002 Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | || ||||| | || |||||| | || |||||||| | || ||| | ||||| || Sbjct 1401003 CGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTG 1401062 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 | | ||||| ||||| || ||||| |||||||| ||| ||| ||| | || || || || Sbjct 1401063 GCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCTCGTGA 1401122 Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTC 61672 |||||| | || ||| ||||| | || || || || | || | |||| Sbjct 1401123 CGAGGGTCTTCACACTGACTTTGC---ATGCCTCCTC-CACTCTCACCTCAAGGGTCGTG 1401178 Query 61673 CGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732 | || || | || || | ||| || || || || || ||||| || | Sbjct 1401179 CCAGTAAGCAGATGATCCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCC 1401238 Query 61733 TGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792 | || || ||| | ||| | ||| |||||||||| | || || ||| |||||| | Sbjct 1401239 TCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTACA 1401298 Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGA 61852 |||| || || || || ||||| | |||| | | || | || | |||| || | | Sbjct 1401299 TTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCA 1401358 Query 61853 AAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912 ||||| || || || ||||| | || || || | ||||||||| || || ||||||| Sbjct 1401359 CCAACCCCTTCGACTTTATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGA 1401418 Query 61913 AACGTGTAGGCGACTATCA 61931 | ||||| | |||||| || Sbjct 1401419 AGCGTGTTGCCGACTACCA 1401437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567258659920