Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pininemorale_20[genbank_20GCA_5F002165215.1_202017-06-02]
153 sequences; 47,778,485 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq5 383 1e-101
seq7 205 7e-48
>seq5
Length=2590615
Score = 383 bits (424), Expect = 1e-101
Identities = 1230/1881 (65%), Gaps = 52/1881 (3%)
Strand=Plus/Plus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
||| || |||||||| || | | |||||| |||| || | ||| ||||||||||||||
Sbjct 1617683 ATCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGT 1617742
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGC 65194
|||||||||| ||| || | ||| ||||| | || | || |||| | | ||
Sbjct 1617743 CTTGAGGCCAAGTTTCCA-GCCTGCAAAGTGCAT-GCTGGTGATCTTGCCCATCGTGGGG 1617800
Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254
|| || || || |||| ||||| |||||| ||| | ||| ||||| ||||||
Sbjct 1617801 TCCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCC 1617860
Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GC---GACGTAC 65310
|| | || || | || || ||||||||||| ||||||||||| || ||||| |
Sbjct 1617861 ATCTGAACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACGT-C 1617919
Query 65311 CTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACG 65370
|| || || | ||||| ||| | |||||| ||||| ||||| ||
Sbjct 1617920 GGCA---GGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTT 1617976
Query 65371 CATCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATG 65428
||| | || ||||||| ||||| |||| ||| | |||| | || | | ||||
Sbjct 1617977 CATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC--AGCCAGGGGTTGACA 1618034
Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488
|| |||||||| || | || ||||| || ||||| ||||| ||| ||| || |||
Sbjct 1618035 ACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAG 1618094
Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548
| || |||| || ||||| |||| ||| ||||| ||||| ||||| | | ||
Sbjct 1618095 CACTCGTTGTTACCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGA 1618154
Query 65549 GAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACATCGG 65607
||| || | |||| | | | | | || | | || ||||||| ||| | ||
Sbjct 1618155 CTGTTACGGATGCCGTGTGTCTTGACTTCCTCTCGAAGAGTC-TCCCAGTCCCAGA--GG 1618211
Query 65608 TTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGA 65667
| | | | ||| |||||| || || ||| | || | ||| || ||
Sbjct 1618212 T----CAGAGGGTTTGACGTTCCACATGTCAAACTGGAGGATACCCTCAGAGGCGGGGGA 1618267
Query 65668 ACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGC 65727
||| ||| | ||| ||||||||||| || || || | || ||| ||
Sbjct 1618268 ACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAGGCAGTGAGGGC 1618327
Query 65728 GGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTA 65787
|| ||||||||||||||| || | || || ||||| ||||| |||| |
Sbjct 1618328 AGCGTGATAAATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAA 1618387
Query 65788 CGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847
||||||| || | |||| ||||| || || ||||| || | ||| ||||| ||
Sbjct 1618388 GGGCATACGCAGAGCAAGGAAAGCATCGGCGAGGCCCTGAACACCCAGACCAATGGGTCG 1618447
Query 65848 ATGACGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATCGATAATG 65905
|| |||| || | || || |||| | |||||||||| || | |||||| ||
Sbjct 1618448 GTGGCGCATGTT--ACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATC 1618505
Query 65906 CGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAA--AT 65963
||||| ||||| | || || || || |||| | | ||| || | |
Sbjct 1618506 TTGTTCAAGTTGCGAATAACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCGTAGCAA 1618565
Query 65964 GTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGT 66023
| || |||| || | || ||| || | ||||| || ||||
Sbjct 1618566 GCTTC-----ATCGTAGTTGATG---------AAGGAGGGCAGAGACAGAGAGGCAAGGT 1618611
Query 66024 TGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGC 66083
|||||||||| | |||||||||||| ||||||| |||||| ||||| || || ||
Sbjct 1618612 TGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGC 1618671
Query 66084 AGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCA 66143
|| ||||| || | |||| ||| || |||||||| || || ||||||||||| | ||
Sbjct 1618672 TTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAGAGCA 1618731
Query 66144 TGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCT 66203
|| | || | ||||||||| |||| ||| | ||||||| |||||| | ||||
Sbjct 1618732 TGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAAAGCTTCTGAGCCT 1618791
Query 66204 TCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGAT 66262
| | || | | | |||| | | | | ||||| | |||||| || |||||
Sbjct 1618792 TGATTGT-CTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCC 1618850
Query 66263 TCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCA 66322
|| || | |||| || | || |||| || ||||||||||| | ||| |||||
Sbjct 1618851 TCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCG 1618910
Query 66323 TCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGT 66382
| || ||| ||||| ||| || |||||||| ||||| |||||| ||| ||||| ||
Sbjct 1618911 TTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCGAGGAAAAGATCACGG 1618970
Query 66383 GCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442
|| || |||||| | ||||| || || || | || ||||| || |||| || |
Sbjct 1618971 GCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAAATCGAAGACATCAGAG 1619030
Query 66443 TGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACG 66502
||||| || || ||||||||||| || | || || ||| |||||| ||||||||
Sbjct 1619031 TGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACA 1619090
Query 66503 TAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTG 66562
|| ||||| |||||||||||||| | ||| || || | || || ||| | || |||
Sbjct 1619091 TACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCATTCGATGTACCGTTG 1619150
Query 66563 GTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCG 66622
|| ||| ||||| || || || || ||| ||| ||||| ||||||||||||||
Sbjct 1619151 GTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGACCAATACCACCA 1619210
Query 66623 GCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGT 66680
||| |||| ||||| ||||| || | | | || | | || || ||||| ||
Sbjct 1619211 GCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC--GTAGATTCCCTCAATACTGT 1619268
Query 66681 CACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGA 66740
| |||| || | | | |||| || | |||||| | || ||| |||| ||
Sbjct 1619269 CGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGA 1619328
Query 66741 AGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGA 66800
|||| ||||| | ||| ||||| ||| | | || |||||| |||||| ||||| | ||
Sbjct 1619329 AGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGATTGTATGTCTCCAAGA 1619388
Query 66801 CAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGC 66859
| || || | || || || || | | |||| ||||| | | || |||||
Sbjct 1619389 CTCGCTCGATATCATCACCCCAGATACCAACAGACACA-CGCATGATCATGTGCTGAGGG 1619447
Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919
|| ||||| | | | | | || | | | ||| || || |||| ||||||| |||
Sbjct 1619448 CGCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCA 1619507
Query 66920 AAGTACGAGTAATTGAAATCG 66940
||||| ||| | |||||||
Sbjct 1619508 AAGTATTGGTATTGGAAATCG 1619528
>seq7
Length=1585612
Score = 205 bits (226), Expect = 7e-48
Identities = 567/859 (66%), Gaps = 28/859 (3%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
||||||| |||||||| ||||| || |||||||||||||| | |||||| | ||| |
Sbjct 1400593 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 1400652
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
||||| || | | |||||| | || || | | ||| | || ||| ||
Sbjct 1400653 TCCAAGGATCTCCACGACTGGAACAACCGCCTAACT---GCTGATGAGCAGTTCTTTGTC 1400709
Query 61204 ---CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260
|| | | || ||||| || || || || ||||||||||| ||||| | | ||
Sbjct 1400710 TCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAG 1400769
Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
|| ||| ||||| || | | ||||| ||||| |||||||||||||||||
Sbjct 1400770 CGATTCAGTGGTGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGCTTCCAGATCATG 1400829
Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380
|||||||| | || || |||| ||| | || ||||| || ||||||| |||||
Sbjct 1400830 ATGGAGAACATTCATTCCGAGACCTACTCCCTCCTTATCGACACATACATCAAGGAGCCC 1400889
Query 61381 GCGGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA-- 61437
|| | || | | || | ||||| ||||| ||||| || || || | | ||||
Sbjct 1400890 GCCCAGCG-AACCTATCTCTTCAACGCCATTGAGACCATTCC----CTGCATCCGAAAGA 1400944
Query 61438 --GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATT 61493
|| || |||||| || ||||| |||| | || | || | |||| | || |
Sbjct 1400945 AGGCTGACTGGGCCATCCGATGGAT--CCAGGATAAGGACTCCTCCTTTGCCCAGCGTCT 1401002
Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553
| || ||||| | || |||||| | || |||||||| | || ||| | ||||| ||
Sbjct 1401003 CGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTG 1401062
Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613
| | ||||| ||||| || ||||| |||||||| ||| ||| ||| | || || || ||
Sbjct 1401063 GCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCTCGTGA 1401122
Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTC 61672
|||||| | || ||| ||||| | || || || || | || | ||||
Sbjct 1401123 CGAGGGTCTTCACACTGACTTTGC---ATGCCTCCTC-CACTCTCACCTCAAGGGTCGTG 1401178
Query 61673 CGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732
| || || | || || | ||| || || || || || ||||| || |
Sbjct 1401179 CCAGTAAGCAGATGATCCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCC 1401238
Query 61733 TGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792
| || || ||| | ||| | ||| |||||||||| | || || ||| |||||| |
Sbjct 1401239 TCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTACA 1401298
Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGA 61852
|||| || || || || ||||| | |||| | | || | || | |||| || | |
Sbjct 1401299 TTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCA 1401358
Query 61853 AAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912
||||| || || || ||||| | || || || | ||||||||| || || |||||||
Sbjct 1401359 CCAACCCCTTCGACTTTATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGA 1401418
Query 61913 AACGTGTAGGCGACTATCA 61931
| ||||| | |||||| ||
Sbjct 1401419 AGCGTGTTGCCGACTACCA 1401437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567258659920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |