Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq4 488 9e-136 seq3 107 3e-21 >seq4 Length=8388633 Score = 488 bits (540), Expect = 9e-136 Identities = 286/295 (97%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| ||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct 8382442 TACTAAGCTCAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 8382500 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8382501 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 8382560 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 8382561 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 8382620 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8382621 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 8382680 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8382681 CAAATGTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 8382735 Score = 127 bits (140), Expect = 3e-27 Identities = 82/90 (91%), Gaps = 6/90 (7%) Strand=Plus/Plus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7900222 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 7900281 Query 152 ATCGAAG------GATCAAAAAGCAACGTC 175 ||||||| |||||||||| ||||| Sbjct 7900282 ATCGAAGGATAACGATCAAAAAGAGACGTC 7900311 Score = 122 bits (134), Expect = 1e-25 Identities = 83/92 (90%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| || |||||| |||| || || |||||||||||||||||||||||||| ||||| Sbjct 7899713 TACTATGCTCAATTACTATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTATCTCA 7899771 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||||||| Sbjct 7899772 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 7899803 >seq3 Length=8783590 Score = 107 bits (118), Expect = 3e-21 Identities = 73/81 (90%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 5 AAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGAC 64 |||| ||||||||||| || || |||||||||||||||||||||||||||||||| ||| Sbjct 1632285 AAGCCCAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCACGAC 1632343 Query 65 GGTCTAAACCCAGCTCACGTT 85 ||||||| ||||||| ||||| Sbjct 1632344 GGTCTAAGCCCAGCTTACGTT 1632364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854398453536