Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq4 224 2e-56 >seq4 Length=8388633 Score = 224 bits (248), Expect = 2e-56 Identities = 223/282 (79%), Gaps = 14/282 (5%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| ||||||||||||||||||||| |||| |||||| Sbjct 8382444 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 8382387 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 8382386 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 8382327 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| || ||| | | || ||| | ||| ||| | |||||||||||||| | Sbjct 8382326 GAACGCGGCGATAC-CACCCGCATGT-ATAGATGGACAAGAATAGGCTTCGGCTTAGCGT 8382269 Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||||||||| | | |||| || |||||||| | | | | | ||| || Sbjct 8382268 CTTAGCAGGCGATTCCTCCACGGCGCTC-----GAAGCGCGTCGTGGT-AATTCGCGTAT 8382215 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || ||||||| || || ||| |||||||||||||||||| Sbjct 8382214 TGTAATTTCAACACAAGCGGGGTCAAATCCTTTGCAGACGAC 8382173 Score = 131 bits (144), Expect = 3e-28 Identities = 105/123 (85%), Gaps = 3/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| |||||||||||||||||| ||||||| || || Sbjct 7899715 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTATCTGACCGGGTCGT 7899658 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||||||| |||||||||| |||| ||||||| || ||| ||| Sbjct 7899657 GTTAGGAAGCTACCATCTGCTGGATAATGGCTGAACCCCTCCAAGTCAG-ATTCATACCA 7899599 Query 121 GAA 123 ||| Sbjct 7899598 GAA 7899596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198563584