Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4 756 0.0 seq2 125 2e-26 >seq4 Length=8388633 Score = 756 bits (838), Expect = 0.0 Identities = 471/504 (93%), Gaps = 1/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8387153 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 8387212 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 8387213 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 8387272 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| | Sbjct 8387273 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 8387332 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||| || || | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 8387333 GGCCAATACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 8387392 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| Sbjct 8387393 CAAGGCCATGCGATTCGAGGAGTTATCATGAATCACCAGTGAGCCCCGAAGGGCATTGGT 8387452 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 8387453 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 8387512 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| Sbjct 8387513 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 8387572 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 8387573 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 8387631 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 8387632 AGACAAGCATATGACTACTGGCAG 8387655 >seq2 Length=9166667 Score = 125 bits (138), Expect = 2e-26 Identities = 69/69 (100%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 9 TCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGT 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1131537 TCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGT 1131478 Query 69 CGGGATTGG 77 ||||||||| Sbjct 1131477 CGGGATTGG 1131469 Score = 95.1 bits (104), Expect = 4e-17 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 172 ACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA 231 ||||| | ||||| || || | ||||| | |||||||||| |||||||||||||||||| Sbjct 1125971 ACCATATTTGGCCAATACCCAAACATCGGATGTTGATAGGGAAGAAATTTGAATGAACCA 1125912 Query 232 TCGCCGGCTCAAGGCCATGC 251 |||||||| ||||||||||| Sbjct 1125911 TCGCCGGCGCAAGGCCATGC 1125892 Score = 82.4 bits (90), Expect = 2e-13 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 195 CATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGAT 254 |||||||||||||||| | |||||| | ||||| ||||||||||| ||| |||||||||| Sbjct 2063674 CATCGAAAGTTGATAGAGAAGAAATCTAAATGAGCCATCGCCGGCGCAAAGCCATGCGAT 2063733 Query 255 TCG 257 ||| Sbjct 2063734 TCG 2063736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510397266176