Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 262 3e-65 >seq3 Length=8783590 Score = 262 bits (290), Expect = 3e-65 Identities = 1118/1745 (64%), Gaps = 56/1745 (3%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||||||||| | | |||||| |||| || | || ||||||||||| || Sbjct 3509521 ATCGACAGTGAACTGGATAGGAGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGT 3509580 Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||| || ||| ||| || ||| ||||| || | || || | | | || Sbjct 3509581 CTTGAGACCGAGCTT-CCAGCCAGCGAAGTGCATAC-TGGTGATCTTACCCATGGTAGGG 3509638 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || || | || || |||||| || | |||||| || |||||| Sbjct 3509639 TCCTTCATGTGAATGTTGAGAGATTGGGACTGATCAATAAAGGCACCACGGTCCGCAGCC 3509698 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GCGACGTACCTC 65313 || | | | | || || |||||||| || ||||||||||| || | || || Sbjct 3509699 ATTTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGAGCTTTG-ACATC 3509757 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 || || | |||| ||||| ||||| | ||||| ||||| || ||| Sbjct 3509758 GGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCAT 3509817 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATGTT---GAACCAAGTGACGATTGATGAC 65430 | || ||||| | ||||| |||| ||||| | ||| | || | |||| || Sbjct 3509818 AGCATCGGACCAAAGACCCATGTCGACAAGATCCTTCAGAAGCCAGGGG---TTGACAAC 3509874 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 ||||| ||||| | || || || || ||||||||||| ||| ||| || ||| | Sbjct 3509875 CTGGAATTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCA 3509934 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550 || ||||||| ||||| || | || ||||| ||||| ||||| || | | Sbjct 3509935 CTCGTTGTTGCCAAGAATCTGCGACGTGCTGGCAGTAGGCATAGGAGCAACGAGTAGACT 3509994 Query 65551 GTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TC--- 65605 ||| || | |||| | | | || | | || | ||||||| ||| | || Sbjct 3509995 GTTGCGGATACCGTGCGTCTTAACATCCTCCCGGAGGGATTCCCAGTCCCAAAGGTCAGA 3510054 Query 65606 -GGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGT----TCCGATACTGG 65660 ||||| ||||| | ||||| || || || | ||||| || Sbjct 3510055 GGGTTT------GACATTC------CACATGTCAAACTGGAGAATACCCTCCGA----GG 3510098 Query 65661 CCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTC 65719 | || || || |||| | ||| |||||||||||||| || || |||| ||| Sbjct 3510099 CAGGAGAGCCCTTGAAAGTGGAGTAGGGGCCCTCCTCCTTGGCGAGCTGCACAGA-GGTG 3510157 Query 65720 TCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCG 65779 || || || || ||||||||||| || | || || ||||| |||||| Sbjct 3510158 GTAAGAGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCAGGA 3510217 Query 65780 CTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCG 65839 ||| | ||||| | | | || | || || ||||||||||| |||| ||| Sbjct 3510218 GACTCAAAGGGCATGCGGAGTGCAAGGAAGGCATCAGCGAGACCTTGAACACCAAGACCA 3510277 Query 65840 ATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCG 65899 ||||| || ||||||| ||| | || || | |||||||||| || | |||| Sbjct 3510278 ATGGGTCGGTGACGCATGTTGCTGTTGCGAGCTTCTTGCACAGGGTAGTGGTTTACATCG 3510337 Query 65900 ATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATC 65958 ||||| ||||| ||||| || || || || | ||| || || ||| || Sbjct 3510338 ATAATCTTGTTCAAGTTGCGGACAACGACTTGAGTGACATCGTGAAGCTTCTT-GAAGTC 3510396 Query 65959 AAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGC 66018 || || | || | | | | | || || | | |||| || || Sbjct 3510397 GTAACA---AGCATCTTCATAATTAATGAA----AGAA----GGCAGAGACAAG-GAGGC 3510444 Query 66019 GAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATT 66078 |||||||| ||||| | ||| ||||| ||| ||||| | || |||||||| || || Sbjct 3510445 AAGGTTGCAAACAGCAACCTCATCAGGGGCGCAGTACTCAATGATCTCGGTGCAAAGGTT 3510504 Query 66079 ACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTA 66138 || || ||||| || | |||| ||| || |||||||| ||||| ||||||||| Sbjct 3510505 GGAGCTTCGAATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTA 3510564 Query 66139 CATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCG 66198 | |||| | || | |||||||| |||| ||||| |||||||| |||||| | Sbjct 3510565 GAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGGATGGCGTACCAAAGCTTCTG 3510624 Query 66199 TGCCTTCACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGA 66257 ||||| | | || | | |||| ||| | | ||||| | ||||| || || | Sbjct 3510625 GGCCTTGATAG-ACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAGAGCCTCAA 3510683 Query 66258 AGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAAT 66317 | ||||| | || | ||| | || |||| || || ||||| || | ||| | Sbjct 3510684 ACTCGTCACCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCATT 3510743 Query 66318 CACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGAT 66377 | || | || || ||||| |||||| |||||||| ||||| || || ||| || | Sbjct 3510744 CGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCAAAGAGCCAGGAACAGGT 3510803 Query 66378 CGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGT 66437 | || || || ||| || | |||||||| || || | || |||||||| |||| | Sbjct 3510804 CACGAGCGCGGACCTCTTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACAT 3510863 Query 66438 CGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGT 66497 |||| ||||| || || |||||||| ||||| | || || ||| ||||| |||| Sbjct 3510864 CGGCGTGCCAAGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTTGTTACCACCCTGGT 3510923 Query 66498 CGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGC 66557 |||| || ||||| || ||||||||||| | ||| || || | |||||||| | | Sbjct 3510924 CGACATAACGAGCAGTGTTATTGAAGACACGTAGCATGGGAACAACACCGTTAGAAGTAC 3510983 Query 66558 CATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATAC 66617 | ||||| ||| ||||| || || || || || |||||| |||| ||||||| Sbjct 3510984 CGTTGGTTCCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGAACGTTCAAGCCAATAC 3511043 Query 66618 CACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGG 66677 |||| ||| |||| || || |||||| | || | | || ||||||||| Sbjct 3511044 CACCAGCCATCTTAGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCGTCAATGC 3511103 Query 66678 AGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCG 66737 ||| |||| || | ||| ||||||| || || || | || || | || Sbjct 3511104 TGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAGGGGTACCAGCGT 3511163 Query 66738 AGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGA 66797 ||| || ||||| | ||| || || ||| | | || |||||| ||||| ||||| | Sbjct 3511164 TGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTGGACATGAGGTTGTATGTCTCCA 3511223 Query 66798 TGACA 66802 |||| Sbjct 3511224 AGACA 3511228 Score = 210 bits (232), Expect = 2e-49 Identities = 572/861 (66%), Gaps = 30/861 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || |||||||||||||| | |||||| ||||| | Sbjct 2692965 ATCTGGCAGATGTACAAGAAGGCAGAGGCTTCCTTCTGGACAGCCGAGGAGATCGATCTT 2692906 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | ||| | | | ||| || ||| | Sbjct 2692905 TCCAAGGATCTCCACGACTGGAACAACCGTCTGACTGCAGATGAGCAGTTCTTCGTCTCC 2692846 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || || ||||||||||| ||||| | | || || Sbjct 2692845 CACATCCTCGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTTGTTGAGCGA 2692786 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| ||||| || | | ||||| || || |||||||| |||||||| ||| Sbjct 2692785 TTCAGTGGCGAGGTCCAGATTCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGATG 2692726 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| ||||||| |||| ||| | ||||| || || ||||||| ||||| || Sbjct 2692725 GAGAACATCCACTCCGAGACATACTCCCTACTCATTGACACCTACATCAAGGAGCCTGCC 2692666 Query 61384 GAACGTGAACGAT---TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG-- 61438 || | ||| || | ||||| ||||| || || || || || | | ||||| Sbjct 2692665 CAAAG--AAC-ATACCTCTTCAACGCCATTGACACTATTCCT----TGCATCCGAAAGAA 2692613 Query 61439 --CGGATTGGGCC-TTCAATTGGATCACCAGTACAACGGCTAC--ATTTGGTGAACGATT 61493 | || |||||| ||| || ||||| ||| |||| | || | ||||| | |||| | Sbjct 2692612 GGCTGACTGGGCCATTCGAT-GGATC--CAGGACAAGGACTCCTCATTTGCTCAACGTCT 2692556 Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | || ||||| | || |||||| | || ||||| || | |||||| | || || || Sbjct 2692555 TGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCTATTTTCTG 2692496 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 | | ||||| ||||| || ||||| |||||||||||| ||| ||| | || || || || Sbjct 2692495 GCTCAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGA 2692436 Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTC 61672 |||||| | || ||| ||||| | || || || || | || | ||| Sbjct 2692435 CGAGGGTCTTCACACTGACTTTGC---CTGCCTCCTC-CACTCTCACCTTAAGGGACGTG 2692380 Query 61673 CGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732 | || || | || || | || || || || || || ||||| || | Sbjct 2692379 CCAGCAAGCAGATGATCCAGGACATCATCACCGATGCCGTTACCATTGAGCAGGAGTTCC 2692320 Query 61733 TGACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791 | ||||| ||| | ||| | | | || | |||||||| | || ||| |||||| Sbjct 2692319 TTACTGAGGCTCT-CCCTTGTGCTCTTCTGGGCATGAACTCCAACCTCATGAAGCAGTAC 2692261 Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851 || || ||||| || || |||||| | || | | | |||| || | | || || | Sbjct 2692260 ATCGAGTTTGTCGCTGATCGTCTGCTCGTTGCTCTCGGTAACGAGAAGGTGTACAAGGCT 2692201 Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 | |||||| || || |||||||| | || || |||| ||||||||| || ||||||||| Sbjct 2692200 ACAAACCCCTTCGACTTCATGGAGAACATCTCTCTGGGTGGCAAGACCAACTTTTTCGAG 2692141 Query 61912 AAACGTGTAGGCGACTATCAA 61932 || || || | |||||| ||| Sbjct 2692140 AAGCGCGTTGCCGACTACCAA 2692120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567122989840