Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq78 686 0.0
>seq78
Length=7745
Score = 686 bits (760), Expect = 0.0
Identities = 555/663 (84%), Gaps = 10/663 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| || ||||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 5027 TGTAAATCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 4968
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 4967 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 4908
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 4907 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTT 4848
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
|||||||||| | | | ||| | || ||| || ||||||| ||| |
Sbjct 4847 ATGACCAGACTTGGGCTTGGATAATCATCTGGGGTTCTC-TCCAGTGCACTTTTC-CAGC 4790
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||||||||||| | || | |||||||||| |||||||||||| || |||||
Sbjct 4789 CCAGGCCAGCATCAGTTTTCGCCGGGGGATAAAGGCTTCGGGAATGTGGCTCCTCTCGGG 4730
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381
| ||||||||||||| | | ||| | | | |||||||||| |||||| | || ||
Sbjct 4729 GAGTGTTATAGCCCGTTGCGTAATAC-CCTGGTGGGGACTGAGGTTCGCGCTTCTGCAAG 4671
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
||||||||||||||||| | | || ||||||||| |||||||||||||||||| | |
Sbjct 4670 GATGCTGGCGTAATGGTCATCAACGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCTT 4612
Query 442 C-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500
| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| ||
Sbjct 4611 CGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA- 4553
Query 501 CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560
| || ||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 4552 ---GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCAT 4496
Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620
| | |||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 4495 ACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTGTAGGGTGAAGCCAGAGGAAACT 4436
Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680
||||||||||||||||||||||||| |||||||||||||||||||| |||| || ||||
Sbjct 4435 CTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGGGCATGGGGG 4376
Query 681 CGA 683
|||
Sbjct 4375 CGA 4373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079989682550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |