Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq78 753 0.0
seq72 75.2 3e-11
>seq78
Length=7745
Score = 753 bits (834), Expect = 0.0
Identities = 470/504 (93%), Gaps = 1/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7003 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 7062
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 7063 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 7122
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 7123 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 7182
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| || || | |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 7183 GGCCAATACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCA 7242
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||| ||||||||||| |||||||| ||||| |||||
Sbjct 7243 CAAGGCCATGCGATTCGAGGAGTTATCATGAATCACCAGTGAGCCCCGGAGGGCATTGGT 7302
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 7303 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 7362
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||
Sbjct 7363 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 7422
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 7423 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 7481
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 7482 AGACAAGCATATGACTACTGGCAG 7505
>seq72
Length=117811
Score = 75.2 bits (82), Expect = 3e-11
Identities = 49/53 (92%), Gaps = 1/53 (2%)
Strand=Plus/Minus
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTA 473
|||||||||||||| ||||||| |||||| ||||||||||||||||||||||
Sbjct 52 GCCATTCGCAGTTTTGCTGTATA-ATTGCTCATACTTAGACATGCATGGCTTA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510392734976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |