Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq51 289 2e-73 seq221 167 2e-36 >seq51 Length=398837 Score = 289 bits (320), Expect = 2e-73 Identities = 1135/1757 (65%), Gaps = 46/1757 (3%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||||||||| | ||||| |||| || | || |||||||||||||| Sbjct 42160 ATCGACGGTGAACTGGATGGGGGCGGCAGCAGCCTGTGTACGGAGGTAGTACATGCCGGT 42219 Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||| || ||| ||| || ||| ||||| | || | || |||| | | | || Sbjct 42220 CTTGAGACCGAGCTT-CCAGCCAGCGAAGTGCAT-GCTGGTGATCTTGCCCATTGTAGGG 42277 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || || | |||||| ||| |||||| | |||||| || |||||| Sbjct 42278 TCCTTCATGTGAATGTTGAGAGACTGAGACTGGTCGATGAAGGCACCACGGTCCGCAGCC 42337 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | | | | || || |||||||| || ||||||||||| | | | | || Sbjct 42338 ATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGA-GCCTTGATATC 42396 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 || || | |||| ||||| ||||||| | ||||| || || || ||| Sbjct 42397 GGCAGGGATGTTGGGGATGTTCTGGATAGAACCACCATCAGCAATGATACGGTTCTTCAT 42456 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431 || ||||| | ||||| |||| ||||| |||| ||| | | |||| ||| Sbjct 42457 ACCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAG--AAGCCAGGGGTTGACAACT 42514 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 ||||||||||| | || || || || ||||||||||| ||| ||| || ||| | Sbjct 42515 TGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCAC 42574 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| ||||| || | ||| ||||| ||||| ||||| || | || | Sbjct 42575 TCGTTGTTGCCAAGAATCTGCGAGGTACTAGCAGTGGGCATAGGAGCAACGAGCAGACTG 42634 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611 || || | |||| | | | | | || | ||||| | ||| | | | | Sbjct 42635 TTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGAGATTCCCACTCCCAAA---GATCA 42691 Query 65612 TCG---TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAA 65668 | | ||||| | |||||||| || || | || | ||| || || Sbjct 42692 GAGGGCTTGACATTC------CACATATCAAACTGGAGAATGCCCTCAGAGGCAGGAGAG 42745 Query 65669 CCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGC 65727 || ||| | ||| |||||||||||||| || || |||| ||| || || Sbjct 42746 CCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGCTGCACAGA-GGTAGTAAGGGC 42804 Query 65728 GGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTA 65787 || |||||| |||||||| || | || || ||||| ||||| ||| | Sbjct 42805 AGCGTGATAAATAGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCGGGAGACTCAAA 42864 Query 65788 CGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847 ||||| | | | || | || || |||||||| || || | ||| ||||| || Sbjct 42865 GGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGGACACCGAGACCAATGGGTCG 42924 Query 65848 ATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCG 65907 ||||||| ||| | ||||| | |||||||||| |||| |||||||| Sbjct 42925 GTGACGCATGTTGCTGTTGCGAGCCTCTTGAACAGGGTAGTGGTTGACGTCGATAATCTT 42984 Query 65908 ATTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAAAATGTT 65966 ||||| ||||| || || || || | ||| || || ||| || Sbjct 42985 GTTCAAGTTGCGGACAACGACTTGAGTGACTTCGTGTAGCTTCTT-GAAGTCG------- 43036 Query 65967 TAGGACG-ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTG 66025 ||| | | ||| | | | | | || || | | |||| || || |||||| Sbjct 43037 TAGCAAGCATCTTCATAGTTGATGAA-AGAA----GGCAGAGACAAG-GAGGCAAGGTTG 43090 Query 66026 CAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAG 66085 || || || | ||| ||||| ||| ||||| | ||| || |||||||| || || Sbjct 43091 CAAACGGCGACCTCATCAGGGGCGCAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTT 43150 Query 66086 CGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATG 66145 || ||||| || | |||| ||| || |||||||| ||||| ||||||||| | |||| Sbjct 43151 CGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATG 43210 Query 66146 TACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTC 66205 | || | |||||||| |||| ||| | ||||||| |||||| | ||||| Sbjct 43211 AAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGTTTTTGAGCCTTG 43270 Query 66206 ACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTC 66264 | | || | | |||| || | | ||||| | |||||| || || || || Sbjct 43271 ATAG-ACTTGCGACCCTTGCCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAACTCATC 43329 Query 66265 ACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATC 66324 ||| | || | |||| || |||| || || ||||| || | ||| || || | Sbjct 43330 ACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCGCCGTT 43389 Query 66325 CTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGC 66384 || || ||||| ||| || |||||||| ||||| || ||| ||| || || || || Sbjct 43390 CTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGAGC 43449 Query 66385 TCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATG 66444 || |||||| | ||||| || || || | || |||||||| |||| |||||| || Sbjct 43450 GCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTG 43509 Query 66445 CCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTA 66504 |||||| || ||||| |||||||| | || || ||| ||||| ||||||||||| Sbjct 43510 CCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGTTACCACCCTGGTCGACGTA 43569 Query 66505 GCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGT 66564 ||||| |||||||| ||||||| ||| || |||| ||||| || | |||||||| Sbjct 43570 ACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTGGT 43629 Query 66565 GCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624 ||| ||||| || || || || || ||| |||||| ||||||||||| || Sbjct 43630 ACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCATTCAAGCCAATACCACCAGC 43689 Query 66625 CGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCA 66682 | |||| || || |||||| || | | | || | | || || |||||| ||| Sbjct 43690 CATCTTGGAAATCATGGCACAAGTCTTGAGAGTATC--GTAGATACCATCAATGCTGTCC 43747 Query 66683 CCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAG 66742 |||| || | ||| ||||||| ||||| || | || || |||| ||| Sbjct 43748 TCCTTCATATCAACAAGGAAGCATGATGATAGTTGAGGCTGTGGGGTACCGGCGTTGAAT 43807 Query 66743 AGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACA 66802 | ||||| | || || || ||| | | || |||||| ||||| || || | |||| Sbjct 43808 AAAGTGGGGCTCGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTATGTTTCCAAGACA 43867 Query 66803 GCATCAATGTTTTCGCC 66819 ||||| || || || Sbjct 43868 CGCTCAATATTGTCACC 43884 >seq221 Length=98460 Score = 167 bits (184), Expect = 2e-36 Identities = 560/860 (65%), Gaps = 30/860 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || |||||||||||||| | |||||| ||||| | Sbjct 71765 ATCTGGCAAATGTACAAGAAGGCAGAGGCTTCCTTCTGGACAGCTGAGGAGATCGATCTC 71824 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | ||| | | | || ||| | ||||| Sbjct 71825 TCCAAGGATCTTCACGACTGGAACAACCGTCTGACTTCAGACGAGCAATACTTCATCTCC 71884 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || || || |||||||| ||||| | | || ||| Sbjct 71885 CACATTCTTGCTTTCTTCGCTGCCTCCGATGGCATCGTCAACGAGAACCTCGTTGAGCGT 71944 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | ||||| || || ||||| ||||||||||| || Sbjct 71945 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGCTTCCAGATCATGAT 72003 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| || | ||| | ||||| || || ||||||| ||| | || Sbjct 72004 GGAGAACATCCACTCCGAAACATACTCCCTGCTCATTGACACCTACATCAAGGACCCTGC 72063 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA----G 61438 | || | | ||||| ||| | || || || || || | | |||| | Sbjct 72064 TCAGCGCACATACCTCTTCAACGCCGTTGACACCATTCC----TTGCATCCGAAAGAAGG 72119 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACA--ACGGCTACATTTGGTGAACGATTGCT 61496 ||||||||||| || ||||| |||| ||| | || | |||| | | || | | Sbjct 72120 CGGATTGGGCCATCCGATGGAT--CCAGGACAAGAACTCTTCCTTTGCTCAGCGTCTTGT 72177 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || ||||| | || |||||| | || |||||||| | ||||| | ||||| ||| | Sbjct 72178 AGCTTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTTGCTTCCATCTTCTGGCT 72237 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| || || || ||||| ||||||| ||| ||| ||| | || || || || || Sbjct 72238 CAAGAAGCGCGGCCTCATGCCTGGTCTGAGCTTTTCCAACGAGCTCATCTCTCGTGATGA 72297 Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTC 61676 ||| | || ||| ||||| ||| || | || || | || | ||| Sbjct 72298 GGGTCTTCACACTGACTTTGC----CTGC--CTCCTTCACTCTCACCTCAA-GGGACGTG 72350 Query 61677 GGAGGAGCGTGTGGGT----GAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732 || | | | | || ||| | || || || || || || ||||| || | Sbjct 72351 CCAGCAAACAGATGATTCAGGAAATTATCACCGATGCCGTTACCATTGAGCAGGAGTTCC 72410 Query 61733 TGACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791 | ||||| ||| | ||| | | | || |||||||||| | || ||| |||||| Sbjct 72411 TTACTGAGGCTCT-CCCTTGTGCTCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTAC 72469 Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851 || || || || || || ||||| | |||| | | || | || | | || || | Sbjct 72470 ATCGAGTTCGTCGCTGATCGTCTCCTCGTCGCTCTCGGCAACGAGAAGGTGTACAAGGCT 72529 Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 | ||||| || || |||||||| | || || || | |||||||| || || |||||| Sbjct 72530 ACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGCGGCAAGACCAACTTCTTCGAG 72589 Query 61912 AAACGTGTAGGCGACTATCA 61931 || ||||| | ||||| || Sbjct 72590 AAGCGTGTTGCTGACTACCA 72609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565669381840