Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 7e-30
seq61 75.2 2e-11
>seq2
Length=623297
Score = 136 bits (150), Expect = 7e-30
Identities = 122/152 (80%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 98 CCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACG 157
|||||| ||||| | ||| ||||||||| |||||||||| || ||| | ||||||
Sbjct 3589 CCGATGCCGGTTTGGGACAAATACAGGTCTGGGATGCCCTTAAATATTCATGATCGCACG 3530
Query 158 CGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTT 217
|||| ||||||| |||||| ||| | || ||||| ||| |||||| ||||||||||
Sbjct 3529 CGCGTGACACTGATGGAGCCAGCGAAT--ATTTCCTTGCCCGAAAGGTCCGGGTAATCTT 3472
Query 218 GTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249
||||||||||||||| || |||||| ||||||
Sbjct 3471 GTTAAACTCTGTCGTCCTTGGGATATAGCATT 3440
>seq61
Length=438497
Score = 75.2 bits (82), Expect = 2e-11
Identities = 67/82 (82%), Gaps = 3/82 (4%)
Strand=Plus/Plus
Query 129 TGATGCC-CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187
|||| || |||| ||||||||||||||||||||||| ||||||| ||| || ||||| |
Sbjct 329634 TGATCCCACTTATATGTTCTGGGCCGCACGCGCGCTGCACTGACGGAGTCAGCGAGTACT 329693
Query 188 TCACCTTGGCCGGAAGGTCTGG 209
| ||||| || |||||| ||
Sbjct 329694 T--CCTTGTCCAAAAGGTCCGG 329713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947197755136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |