Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq14 340 1e-88 seq43 201 9e-47 >seq14 Length=298472 Score = 340 bits (376), Expect = 1e-88 Identities = 1217/1879 (65%), Gaps = 48/1879 (3%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || || ||||| || | | |||||| |||| || | ||| ||||||||||| || Sbjct 74477 ATCAACAGTAAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCAGT 74418 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||||||| ||| || | ||| ||||| || | || |||| | | || Sbjct 74417 CTTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATAC-TGGTGATCTTGCCCATCGTGGGG 74360 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || |||| ||||| |||||| ||| | ||| ||||| |||||| Sbjct 74359 TCCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCC 74300 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | | || | || || |||||||| || ||||| ||||| | | | || || Sbjct 74299 ATCTGGACGACCTGGCGCTGAGAGATCTCCCAAACAGTCTTATACAGA-GCCTTGACATC 74241 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 || || | ||||| ||| | |||||| ||||| ||||| || ||| Sbjct 74240 GGCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCAT 74181 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431 | || ||||||| ||||| |||| ||| | |||| | || | | |||| || Sbjct 74180 AGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC--AGCCAGGGGTTGACAACC 74123 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||||| || | || ||||| || ||||| ||||| ||| ||| || ||| | Sbjct 74122 TGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCAC 74063 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| ||||| |||| ||| ||||| ||||| ||||| | | | | Sbjct 74062 TCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGTAGACTG 74003 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611 || || | |||| | | | | | || | | ||||||| ||| | | | | Sbjct 74002 TTACGGATGCCGTGTGTCTTGACTTCCTCTCGAAGAGCCTCCCAGTCCCAGA---GGTCA 73946 Query 65612 TCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG 65671 | | | | ||| |||||| || || || | || | ||| || ||||| Sbjct 73945 GAG--GGCTTG-ACGTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGGGAACCC 73889 Query 65672 AGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCA 65731 ||| | ||| ||||||||||| || || || | || ||| || || Sbjct 73888 TTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAGGCAGTGAGCGCAGCG 73829 Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGC 65791 |||||||||||| || || | ||| || ||||| ||||| | |||| | ||| Sbjct 73828 TGATAAATGGTCTCAAAGATCTGCTTATTGAGCTCACGAGCCTCGGGGGACTCGAAGGGC 73769 Query 65792 ATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 || | || | |||| ||||| ||||| ||||| |||| ||| ||||| || || Sbjct 73768 ATGCGCAGAGCAAGGAAAGCATCGGCAAGACCCTGAACACCAAGACCAATGGGTCGGTGG 73709 Query 65852 CGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGAT 65909 |||| || | || || |||| | |||||||||| || | |||||| || | Sbjct 73708 CGCATGTT--ACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGT 73651 Query 65910 TCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAG 65969 ||| ||||| | || || || || ||| | | ||| || ||| Sbjct 73650 TCAGGTTGCGAATAACAACCTGACTGACCTTGTGCAGCTTCTTGAAGTCG-------TAG 73598 Query 65970 GACG----ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTG 66025 | | |||| || | || ||| || | ||||| || |||||| Sbjct 73597 CAAGCCTCATCGTAGTTGATG---------AAGGAGGGCAGAGATAGAGAGGCAAGGTTG 73547 Query 66026 CAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAG 66085 ||||| || | ||||||||| || ||||||| |||||| ||||| ||||| || Sbjct 73546 CAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAAGATTGGAGCTT 73487 Query 66086 CGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATG 66145 || ||||| || | |||| ||| ||||||||||| ||||| ||||||||||| | |||| Sbjct 73486 CGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCCTTGTAGAGCATG 73427 Query 66146 TACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTC 66205 | || | ||||||||| |||| ||||| ||||||| |||||| | ||||| Sbjct 73426 AATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTG 73367 Query 66206 ACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTC 66264 | ||| | | | |||| | | | ||||| | |||||| || ||||| || Sbjct 73366 ATCGT-CTTGCGACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTC 73308 Query 66265 ACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATC 66324 || | |||| || | || |||| | || ||||| || | ||| ||||| | Sbjct 73307 TCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCACATAAGTGTCCAGTCACCGTT 73248 Query 66325 CTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGC 66384 || || ||||| ||| || |||||||| ||||| ||||| ||| || || || || Sbjct 73247 CTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGGGC 73188 Query 66385 TCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATG 66444 || |||||| | ||||| || || || | || |||||||| |||| |||| || Sbjct 73187 ACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCGGAGTG 73128 Query 66445 CCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTA 66504 ||| || || ||||||||||| || | || || ||| |||||| |||||||| || Sbjct 73127 CCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATA 73068 Query 66505 GCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGT 66564 ||||| |||||||||||||| | ||| || |||| ||||| ||| | || ||||| Sbjct 73067 CCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGTTCGATGTACCGTTGGT 73008 Query 66565 GCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624 ||| ||||| || || || || ||| ||| |||||||||||||||||||| || Sbjct 73007 ACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAGACCAATACCACCAGC 72948 Query 66625 CGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCA 66682 | |||| ||||| ||||| || | | | || | | || || ||||| ||| Sbjct 72947 CATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC--GTAGATTCCCTCAATACTGTCG 72890 Query 66683 CCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAG 66742 |||| || | | | |||| || | |||||| | || ||| |||| |||| Sbjct 72889 TCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAG 72830 Query 66743 AGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACA 66802 || ||||| | ||| ||||| ||| | | || ||||| ||||| ||||| | ||| Sbjct 72829 AGCGTGGGGGAAGCATGCGTGAAGAACTTGCTTGACATCAGGTTGTATGTCTCCAAGACT 72770 Query 66803 GCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCG 66861 || || | || || || || | | |||| ||||| | | || || || || Sbjct 72769 CGCTCGATATCATCACCCCAGATACCAACAGACACA-CGCATGATCATGTGCTGTGGGCG 72711 Query 66862 TTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAA 66921 ||||| | | | | | || | | | ||| || || |||| ||||||| ||||| Sbjct 72710 CTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAA 72651 Query 66922 GTACGAGTAATTGAAATCG 66940 ||| ||| | ||||||| Sbjct 72650 GTATTGGTATTGGAAATCG 72632 >seq43 Length=937570 Score = 201 bits (222), Expect = 9e-47 Identities = 567/860 (66%), Gaps = 28/860 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || |||||||||||||| | |||||| | || | Sbjct 868149 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 868090 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || | | || ||| || ||| | Sbjct 868089 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCT 868030 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || || ||||| ||||| ||||| | | || || Sbjct 868029 CACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCGA 867970 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| ||||| || | | ||||| ||||||||||||||||||||||| ||| Sbjct 867969 TTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGATG 867910 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| | ||||| |||| ||| | |||||||| || || |||| ||||| || Sbjct 867909 GAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTATATCAAGGAGCCCGCC 867850 Query 61384 GAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA----G 61438 | || | | | | ||||| ||||| ||||| || || || | | |||| | Sbjct 867849 CAGCG-AACCTACCTTTTCAACGCCATTGAGACCATTCC----CTGCATCCGAAAGAAGG 867795 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCT 61496 | || |||||| || ||||| ||| | || | || | |||| |||| | | Sbjct 867794 CTGACTGGGCCATCCGATGGAT--CCAAGATAAGGACTCTTCCTTTGCCCAACGTCTCGT 867737 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || || || | || |||||| | || |||||||| | || ||| | || || ||| | Sbjct 867736 TGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATTTTCTGGCT 867677 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| ||||| || ||||| |||||||||||| || ||| | || || || ||||| Sbjct 867676 CAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGA 867617 Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTC 61676 ||| | || ||| ||||| ||| || | || || | || | |||| Sbjct 867616 GGGTCTTCACACTGACTTTGC----CTGC--CTCCTCCACTCTCACCT-AAAGGGCCGTG 867564 Query 61677 GGAG-GAGCGTGTGGGT---GAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732 || ||| || | || || | ||| || || || || |||||||| || | Sbjct 867563 CCAGCAAGCAGATGATTCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCC 867504 Query 61733 TGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792 | ||||| ||| | ||| | || |||||||||| | || || ||| |||||| | Sbjct 867503 TCACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACA 867444 Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGA 61852 |||| || || || || ||||| | |||| | | || | || | |||| || | | Sbjct 867443 TTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCA 867384 Query 61853 AAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912 ||||| || || |||||||| | || || || | |||||||| || || ||||||| Sbjct 867383 CCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGA 867324 Query 61913 AACGTGTAGGCGACTATCAA 61932 | ||||| | |||||| ||| Sbjct 867323 AGCGTGTTGCCGACTACCAA 867304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566851649680