Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq48 107 7e-18 >seq48 Length=814601 Score = 107 bits (118), Expect = 7e-18 Identities = 216/315 (69%), Gaps = 4/315 (1%) Strand=Plus/Plus Query 12733 AACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACC 12792 ||||||||| | | || |||||||| | | ||| || ||||| || | ||||||||| Sbjct 67671 AACATCGTAGTATATGACGTTCATGCCCATAGCCTCAGCGAGGACGGACAGCTGAGAACC 67730 Query 12793 AATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGA 12852 ||||| ||| || || || ||||| || ||||| |||| || || | || || | ||| Sbjct 67731 AATGTGACCGTAGCCAACGATACCCAGAGTCTTGCCTCGAATCTCCCAGC-ACTTGGAGC 67789 Query 12853 AG-TCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAA 12911 | ||||||||| ||||| |||| | || ||| || || |||| |||||| | || Sbjct 67790 TGACCTTGTTCCAGGTGCCTCGGTGCATCTCGTTGGATCGGTCGCCAAGCTGACGGGCAA 67849 Query 12912 GATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTT-GCAAAAGGGAGAA 12970 || || | | | |||| ||||| || || || | | ||| || |||||| || Sbjct 67850 GAACGATGATCTCGGCGATGACCAGCTCAGCGACACTGCGCGAGTTGGCGAAAGGG-GAG 67908 Query 12971 TTAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATG 13030 || ||||| || || || |||| || | || || | ||||| | | || || Sbjct 67909 TTGAAGACGGCGATACCATTCTTGGCGGCGAACTCAAGGTCGACCTGGTTGGTGCCGATA 67968 Query 13031 CAGAAGCATCCTATG 13045 |||||||| || ||| Sbjct 67969 CAGAAGCAGCCGATG 67983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884880676424641