Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq78 107 7e-18
>seq78
Length=140634
Score = 107 bits (118), Expect = 7e-18
Identities = 216/315 (69%), Gaps = 4/315 (1%)
Strand=Plus/Plus
Query 12733 AACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACC 12792
||||||||| | | || |||||||| | | ||| || ||||| || | |||||||||
Sbjct 46653 AACATCGTAGTATATGACGTTCATGCCCATAGCCTCAGCGAGGACGGACAGCTGAGAACC 46712
Query 12793 AATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGA 12852
||||| ||| || || || ||||| || ||||| |||| || || | || || | |||
Sbjct 46713 AATGTGACCGTAGCCAACGATACCCAGAGTCTTGCCTCGAATCTCCCAGC-ACTTGGAGC 46771
Query 12853 AG-TCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAA 12911
| ||||||||| ||||| |||| | || ||| || || |||| |||||| | ||
Sbjct 46772 TGACCTTGTTCCAGGTGCCTCGGTGCATCTCGTTGGATCGGTCGCCAAGCTGACGGGCAA 46831
Query 12912 GATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTT-GCAAAAGGGAGAA 12970
|| || | | | |||| ||||| || || || | | ||| || |||||| ||
Sbjct 46832 GAACGATGATCTCGGCGATGACCAGCTCAGCGACACTGCGCGAGTTGGCGAAAGGG-GAG 46890
Query 12971 TTAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATG 13030
|| ||||| || || || |||| || | || || | ||||| | | || ||
Sbjct 46891 TTGAAGACGGCGATACCATTCTTGGCGGCGAACTCAAGGTCGACCTGGTTGGTGCCGATA 46950
Query 13031 CAGAAGCATCCTATG 13045
|||||||| || |||
Sbjct 46951 CAGAAGCAGCCGATG 46965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884882656733415
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |