Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F001703955.1_202016-
08-12] 4 sequences; 36,178,456 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq1 87.8 7e-12
>seq1
Length=11717239
Score = 87.8 bits (96), Expect = 7e-12
Identities = 120/168 (71%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 21715 AGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGT 21774
||||||| || |||||||||||||| ||||| || || | |||||| | |||||| ||
Sbjct 2953345 AGATGCGCTCGAGGATGAGTTGGGCAATGCGGTCACCCTCCTTGATCTGAAAGTCGGAGT 2953286
Query 21775 CAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGG 21834
| |||||||||||| | ||| ||||| ||| | ||| || | ||| || |
Sbjct 2953285 CGTTGTGGTTGAAGAGAAGGACCTTGACCTGGCCACGGTAATCGGCATCAATGACACCAG 2953226
Query 21835 CGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGA 21882
| || ||||| || ||| |||| ||||| |||| ||||||||
Sbjct 2953225 CACCTGTGTCGATGAAGTGCTTGGAGGCGAGACCTGATCGGGGAGCGA 2953178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084739090551192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |