Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F001703955.1_202016- 08-12] 4 sequences; 36,178,456 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 7e-12 >seq1 Length=11717239 Score = 87.8 bits (96), Expect = 7e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 21715 AGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGT 21774 ||||||| || |||||||||||||| ||||| || || | |||||| | |||||| || Sbjct 2953345 AGATGCGCTCGAGGATGAGTTGGGCAATGCGGTCACCCTCCTTGATCTGAAAGTCGGAGT 2953286 Query 21775 CAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGG 21834 | |||||||||||| | ||| ||||| ||| | ||| || | ||| || | Sbjct 2953285 CGTTGTGGTTGAAGAGAAGGACCTTGACCTGGCCACGGTAATCGGCATCAATGACACCAG 2953226 Query 21835 CGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGA 21882 | || ||||| || ||| |||| ||||| |||| |||||||| Sbjct 2953225 CACCTGTGTCGATGAAGTGCTTGGAGGCGAGACCTGATCGGGGAGCGA 2953178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084739090551192