Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq333 693 0.0 seq351 535 2e-149 seq322 242 2e-61 seq29 91.5 6e-16 >seq333 Length=4014 Score = 693 bits (768), Expect = 0.0 Identities = 553/656 (84%), Gaps = 12/656 (2%) Strand=Plus/Minus Query 30 CTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCT 89 ||||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||| Sbjct 647 CTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATGTCTTCT 588 Query 90 AAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 587 AAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 528 Query 150 CACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCA 209 ||||||| |||||||||||||||| ||||||||||||||||||||||||| || |||| Sbjct 527 CACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTTATGACCA 468 Query 210 GACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGGC 267 |||||| | ||| ||| | || ||| || ||||||| ||| | || ||||| Sbjct 467 GACTTGGGCTTGGTTAATCATCTGGGGTTCTC-CCCAGTGCACTTTTC--CAGTCCAGGC 411 Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327 ||||||||| | || | ||| |||||| |||||||||||| ||| |||||| |||| Sbjct 410 CAGCATCAGTTTTCGCCGGGGGACAAAGGCTTCGGGAATGTGGCTCCCCTCGGGGAGTGT 351 Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCT 387 ||||||||| ||| ||||| | || |||||||||| |||||| | || |||||||| Sbjct 350 TATAGCCCGTTGTGTAATGC-CCTGGCGGGGACTGAGGTTCGCGCTTCTGCAAGGATGCT 292 Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC-TATG 446 ||||||||||| | | || ||||||||| |||||||||||||||||| | || |||| Sbjct 291 GGCGTAATGGTCATCAACGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCTTCGTATG 233 Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 |||||||| |||||| |||||| | |||||||| |||||||||| ||||| || | Sbjct 232 CGAGTGTTCGGGTGTAAAACCCCTACGCGTAATTAAAGTGAACGCAGGTGAGA----GCT 177 Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566 || ||| ||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 176 TCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCATACGGGG 117 Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 116 CCGGACCCGAAAGAAGGTGAACTATGCCTGTGTAGGGTGAAGCCAGAGGAAACTCTGGTG 57 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 ||||||||||||||||||| |||||||||||||||||||| |||| || |||||| Sbjct 56 GAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGGGCATGGGGGCG 1 >seq351 Length=2184 Score = 535 bits (592), Expect = 2e-149 Identities = 524/667 (79%), Gaps = 29/667 (4%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || ||||||||||||||||||||||||||||| ||||||| |||||||| | |||||||| Sbjct 1783 TCAACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGC 1724 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||| Sbjct 1723 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTT 1664 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 |||| ||||||||||| || ||||||||||||||||| |||| |||||| | ||| | Sbjct 1663 TGGAGAGAGAGTTAAACAGTACGTGAAATTGTTGAAATGGAAACGCTTGAAGTCAGTCGC 1604 Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACT--CT--TCTGCGGTCAGGCCAG 270 | | | | ||| || | | | |||||| | || ||| ||| ||||| Sbjct 1603 GTTCTCTGGGATTCAGCCTTGCTTTTGCTTGGTGCATTTCCTAGTCTACGG----GCCAG 1548 Query 271 CATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTAT 330 ||| | | | | ||| |||||| ||||||||||| || |||||| | |||||| Sbjct 1547 CATGAATTTTGACCAATGGAAAAAGGCTGGGGGAATGTGGCACC-TTCGGGTG-TGTTAT 1490 Query 331 AGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTC------CGCGCTCCGG-----CT 379 ||||| || || || | ||| ||||||| | |||| ||| || Sbjct 1489 AGCCCCTTGTCACATACGTTG-GTTGGGATTGAGGTCTTAGTGCACGCTTCGGTTGTGCT 1431 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 |||||||||||||||| | ||| || ||||||||| |||||||||||||||||||||| Sbjct 1430 TTGATGCTGGCGTAATGGCTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAAC 1371 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499 || | |||||||||||||||| ||||||| ||||||||||||||||| || ||||| Sbjct 1370 ATGTCTGCGAGTGTTTGGGTGCAAAACCCGAGCGCGTAATGAAAGTGAT---AGTTGGGA 1314 Query 500 ACCCGT---GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556 ||| | ||||| ||||| || ||| || || | | || |||| ||| ||| Sbjct 1313 ACCTTTCACGAGGG-GCACCGACGCCCGGACCAGACCTTCTGTGACGGATCCGAGGTAGA 1255 Query 557 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616 ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1254 GCATATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGCATAGGGTGAAGCCAGAGGA 1195 Query 617 AACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676 |||||||||||||||||| |||| ||||| ||||||||||||||||||||| |||||||| Sbjct 1194 AACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATGTGGGTATA 1135 Query 677 GGGGCGA 683 ||||||| Sbjct 1134 GGGGCGA 1128 >seq322 Length=6685 Score = 242 bits (268), Expect = 2e-61 Identities = 239/313 (76%), Gaps = 38/313 (12%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-AAAC 466 ||||||||| |||||||||||||||||||||||| | ||| |||||| |||||| |||| Sbjct 5443 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCAAGTGTTAGGGTGTGGAAAC 5384 Query 467 CCGTGCGCGTAATGAAAGTGAACGG----------------AGGTGGGAACCCGTGAGGG 510 || ||||| |||||||||||| || |||| |||| || ||| Sbjct 5383 CCCAGCGCGAAATGAAAGTGAAGGGCAGCGTAAGTTGTCTGAGGTAGGAAATGCTGCGGG 5324 Query 511 T----------------GCACCATCGACCGATCCTGATGTCTTCG----GATGGATTTGA 550 |||| ||||||||||| ||| ||||| || ||||||| Sbjct 5323 CTTCGGTCTGCGGTGTGGCACTATCGACCGATCATGAAC-CTTCGTGGTGAAAGATTTGA 5265 Query 551 GTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCC 610 || ||||| | |||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 5264 GTTTGAGCACATATGTTGGTACCCGAAAGATGGTGAACTATGCCTGAGTAGGGTGAAGCC 5205 Query 611 AGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTG 670 || ||||||||||||||| ||||| |||| ||||| |||||||||||||||||||| ||| Sbjct 5204 AGGGGAAACTCTGGTGGAAGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACTTG 5145 Query 671 GGTATAGGGGCGA 683 ||||||||||||| Sbjct 5144 GGTATAGGGGCGA 5132 Score = 181 bits (200), Expect = 4e-43 Identities = 136/160 (85%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || | || |||||||| | ||||||||||||| Sbjct 5993 GAGTCGCGTTGTTTGGGAATGCAGCGCAAAGTAGGTGGTAAATTCCATCTAAAGCTAAAT 5934 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||||| ||||||||||||| ||||||| |||| ||||||||||||| |||||| || Sbjct 5933 ATTGGTGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAA 5874 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||| || || ||||| || |||||||||| || Sbjct 5873 AGAGAGTTAAAGAGTACCTGAAACTGCTGAAAGGGAACCG 5834 >seq29 Length=276108 Score = 91.5 bits (100), Expect = 6e-16 Identities = 91/115 (79%), Gaps = 5/115 (4%) Strand=Plus/Minus Query 443 TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC 502 |||||||||||| |||||| || || || |||||||||||||||||| ||||| || Sbjct 92189 TATGCGAGTGTTCGGGTGTAAAGTCCTTGGGCGTAATGAAAGTGAACGCAGGTGAGA--G 92132 Query 503 CGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 | | | | ||| |||| | |||| ||||||| | ||||||| ||||||||||| Sbjct 92131 CTTCA--GCGCATCATC-AACGATGCTGATGTTCTTGGATGGAGTTGAGTAAGAG 92080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079979386550