Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24]
961 sequences; 37,784,234 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq333 693 0.0
seq351 535 2e-149
seq322 242 2e-61
seq29 91.5 6e-16
>seq333
Length=4014
Score = 693 bits (768), Expect = 0.0
Identities = 553/656 (84%), Gaps = 12/656 (2%)
Strand=Plus/Minus
Query 30 CTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCT 89
||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||
Sbjct 647 CTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATGTCTTCT 588
Query 90 AAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 AAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 528
Query 150 CACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCA 209
||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||
Sbjct 527 CACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTTATGACCA 468
Query 210 GACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGGC 267
|||||| | ||| ||| | || ||| || ||||||| ||| | || |||||
Sbjct 467 GACTTGGGCTTGGTTAATCATCTGGGGTTCTC-CCCAGTGCACTTTTC--CAGTCCAGGC 411
Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327
||||||||| | || | ||| |||||| |||||||||||| ||| |||||| ||||
Sbjct 410 CAGCATCAGTTTTCGCCGGGGGACAAAGGCTTCGGGAATGTGGCTCCCCTCGGGGAGTGT 351
Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCT 387
||||||||| ||| ||||| | || |||||||||| |||||| | || ||||||||
Sbjct 350 TATAGCCCGTTGTGTAATGC-CCTGGCGGGGACTGAGGTTCGCGCTTCTGCAAGGATGCT 292
Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC-TATG 446
||||||||||| | | || ||||||||| |||||||||||||||||| | || ||||
Sbjct 291 GGCGTAATGGTCATCAACGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCTTCGTATG 233
Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506
|||||||| |||||| |||||| | |||||||| |||||||||| ||||| || |
Sbjct 232 CGAGTGTTCGGGTGTAAAACCCCTACGCGTAATTAAAGTGAACGCAGGTGAGA----GCT 177
Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566
|| ||| ||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct 176 TCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCATACGGGG 117
Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626
|||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 116 CCGGACCCGAAAGAAGGTGAACTATGCCTGTGTAGGGTGAAGCCAGAGGAAACTCTGGTG 57
Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682
||||||||||||||||||| |||||||||||||||||||| |||| || ||||||
Sbjct 56 GAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGGGCATGGGGGCG 1
>seq351
Length=2184
Score = 535 bits (592), Expect = 2e-149
Identities = 524/667 (79%), Gaps = 29/667 (4%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| ||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||
Sbjct 1783 TCAACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGC 1724
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
||||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||||
Sbjct 1723 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTT 1664
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214
|||| ||||||||||| || ||||||||||||||||| |||| |||||| | ||| |
Sbjct 1663 TGGAGAGAGAGTTAAACAGTACGTGAAATTGTTGAAATGGAAACGCTTGAAGTCAGTCGC 1604
Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACT--CT--TCTGCGGTCAGGCCAG 270
| | | | ||| || | | | |||||| | || ||| ||| |||||
Sbjct 1603 GTTCTCTGGGATTCAGCCTTGCTTTTGCTTGGTGCATTTCCTAGTCTACGG----GCCAG 1548
Query 271 CATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTAT 330
||| | | | | ||| |||||| ||||||||||| || |||||| | ||||||
Sbjct 1547 CATGAATTTTGACCAATGGAAAAAGGCTGGGGGAATGTGGCACC-TTCGGGTG-TGTTAT 1490
Query 331 AGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTC------CGCGCTCCGG-----CT 379
||||| || || || | ||| ||||||| | |||| ||| ||
Sbjct 1489 AGCCCCTTGTCACATACGTTG-GTTGGGATTGAGGTCTTAGTGCACGCTTCGGTTGTGCT 1431
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
|||||||||||||||| | ||| || ||||||||| ||||||||||||||||||||||
Sbjct 1430 TTGATGCTGGCGTAATGGCTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAAC 1371
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
|| | |||||||||||||||| ||||||| ||||||||||||||||| || |||||
Sbjct 1370 ATGTCTGCGAGTGTTTGGGTGCAAAACCCGAGCGCGTAATGAAAGTGAT---AGTTGGGA 1314
Query 500 ACCCGT---GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556
||| | ||||| ||||| || ||| || || | | || |||| ||| |||
Sbjct 1313 ACCTTTCACGAGGG-GCACCGACGCCCGGACCAGACCTTCTGTGACGGATCCGAGGTAGA 1255
Query 557 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616
||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1254 GCATATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGCATAGGGTGAAGCCAGAGGA 1195
Query 617 AACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676
|||||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||
Sbjct 1194 AACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATGTGGGTATA 1135
Query 677 GGGGCGA 683
|||||||
Sbjct 1134 GGGGCGA 1128
>seq322
Length=6685
Score = 242 bits (268), Expect = 2e-61
Identities = 239/313 (76%), Gaps = 38/313 (12%)
Strand=Plus/Minus
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-AAAC 466
||||||||| |||||||||||||||||||||||| | ||| |||||| |||||| ||||
Sbjct 5443 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCAAGTGTTAGGGTGTGGAAAC 5384
Query 467 CCGTGCGCGTAATGAAAGTGAACGG----------------AGGTGGGAACCCGTGAGGG 510
|| ||||| |||||||||||| || |||| |||| || |||
Sbjct 5383 CCCAGCGCGAAATGAAAGTGAAGGGCAGCGTAAGTTGTCTGAGGTAGGAAATGCTGCGGG 5324
Query 511 T----------------GCACCATCGACCGATCCTGATGTCTTCG----GATGGATTTGA 550
|||| ||||||||||| ||| ||||| || |||||||
Sbjct 5323 CTTCGGTCTGCGGTGTGGCACTATCGACCGATCATGAAC-CTTCGTGGTGAAAGATTTGA 5265
Query 551 GTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCC 610
|| ||||| | |||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 5264 GTTTGAGCACATATGTTGGTACCCGAAAGATGGTGAACTATGCCTGAGTAGGGTGAAGCC 5205
Query 611 AGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTG 670
|| ||||||||||||||| ||||| |||| ||||| |||||||||||||||||||| |||
Sbjct 5204 AGGGGAAACTCTGGTGGAAGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACTTG 5145
Query 671 GGTATAGGGGCGA 683
|||||||||||||
Sbjct 5144 GGTATAGGGGCGA 5132
Score = 181 bits (200), Expect = 4e-43
Identities = 136/160 (85%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||||||||||||||||| | || | || |||||||| | |||||||||||||
Sbjct 5993 GAGTCGCGTTGTTTGGGAATGCAGCGCAAAGTAGGTGGTAAATTCCATCTAAAGCTAAAT 5934
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
||||| ||||||||||||| ||||||| |||| ||||||||||||| |||||| ||
Sbjct 5933 ATTGGTGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAA 5874
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||||||||||| || || ||||| || |||||||||| ||
Sbjct 5873 AGAGAGTTAAAGAGTACCTGAAACTGCTGAAAGGGAACCG 5834
>seq29
Length=276108
Score = 91.5 bits (100), Expect = 6e-16
Identities = 91/115 (79%), Gaps = 5/115 (4%)
Strand=Plus/Minus
Query 443 TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC 502
|||||||||||| |||||| || || || |||||||||||||||||| ||||| ||
Sbjct 92189 TATGCGAGTGTTCGGGTGTAAAGTCCTTGGGCGTAATGAAAGTGAACGCAGGTGAGA--G 92132
Query 503 CGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557
| | | | ||| |||| | |||| ||||||| | ||||||| |||||||||||
Sbjct 92131 CTTCA--GCGCATCATC-AACGATGCTGATGTTCTTGGATGGAGTTGAGTAAGAG 92080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079979386550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |