Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq333 154 2e-35 seq368 113 5e-23 seq360 75.2 1e-11 >seq333 Length=4014 Score = 154 bits (170), Expect = 2e-35 Identities = 151/192 (79%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 2295 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 2354 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||| | || |||||||||||| ||| |||||||||||| |||| | || Sbjct 2355 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCACAGTAAAAGTCCTGTTTCCCCGCCA 2414 Query 126 C-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183 | ||| |||| ||||| || ||| || | ||| | || |||||| ||| Sbjct 2415 CGCCCAGTGAAGGGCATGAGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTACACGCG 2474 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 2475 GTGAGGCGGACC 2486 >seq368 Length=1447 Score = 113 bits (124), Expect = 5e-23 Identities = 100/124 (81%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 74 CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACACCAATG 133 |||||||||||||||||||||||||||||||||||||||||||||| | |||||| | Sbjct 1447 CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCCCGACACACCCAGT 1388 Query 134 AA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGAGGCG 191 || ||||| | |||||||||||| ||| | | | | |||||| ||||||||| Sbjct 1387 AAAGGGCATGCCGGCTCACCAAGAAGTAAGACCCAGGCAGACAGTACATACCGTGAGGCA 1328 Query 192 GACC 195 |||| Sbjct 1327 GACC 1324 >seq360 Length=1729 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 1663 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 1605 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 1604 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 1567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595194458874