Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq391 457 2e-126 seq333 443 4e-122 seq390 255 1e-65 seq500 197 3e-48 seq36 127 4e-27 >seq391 Length=1074 Score = 457 bits (506), Expect = 2e-126 Identities = 289/310 (93%), Gaps = 2/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||| |||||| ||||| || |||||| | |||||||| Sbjct 720 GAACGAGACCTTAACCTGCTAAATAGTCAGGCCGGCTTTTGCTGGTCGCAGACTTCTTAG 661 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 660 AGGGACTGTCAGCGTCTAGCTGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 601 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct 600 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTC-TCACCTTGGCC 542 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 541 GGAAGGTCTGGGTAATCTTGTGAAACTTTGTCGTGCTGGGGATAGAGCATTGCAATTATT 482 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 481 GCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 422 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 421 GCCCTTTGTA 412 >seq333 Length=4014 Score = 443 bits (490), Expect = 4e-122 Identities = 284/309 (92%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | ||| |||||||||| Sbjct 1817 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 1758 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1757 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 1698 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| ||| Sbjct 1697 GATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTACTT--CCTTGTCCG 1640 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1639 AAAGGTCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 1580 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 1579 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 1520 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 1519 CCCTTTGTA 1511 >seq390 Length=1079 Score = 255 bits (282), Expect = 1e-65 Identities = 213/260 (82%), Gaps = 3/260 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||||||||| | || | ||| || | ||||||| |||||||||||||||||| Sbjct 291 CTTCTTAGAGGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCTG 350 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 351 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCGTTCAACGAGTATAC 410 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||||| || |||||||||||||||||| || ||||||| |||||||| | Sbjct 411 AACCTTGATCGATAGGTCTGGGTAATCTTGTGAATGCGCATCGTGCTAGGGATAGACTGT 470 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||| | |||| |||||||||| |||||||| ||| ||||||||| || |||| Sbjct 471 TGCAATTTTCAGTCTTGAACGAGGAATTCCTAGTAAACGCAAGTCATCAGCTTGCATTGA 530 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 531 TTACGTCCCTGCCCTTTGTA 550 >seq500 Length=623 Score = 197 bits (218), Expect = 3e-48 Identities = 193/244 (79%), Gaps = 16/244 (7%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCG------CTTTGGCGGGTCGCCGGCT 73 || |||||||| | |||||||| |||| | || | || |||| || ||| Sbjct 237 GAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGG----CCAGCT 182 Query 74 TCTTAGAGGGACTATCGGC---TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| |||| | | |||| |||||||||||||||||||||||||||| Sbjct 181 TCTTAGAGGGACTA-CGGCCTTTTAGGCCGC-GGAAGTTTGAGGCAATAACAGGTCTGTG 124 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| | ||||||| | || Sbjct 123 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGCTTATAG 64 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| ||| | |||||||||| | ||| | ||||| |||||||||| ||||| Sbjct 63 CCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTG 5 Query 251 CAAT 254 |||| Sbjct 4 CAAT 1 >seq36 Length=243097 Score = 127 bits (140), Expect = 4e-27 Identities = 82/90 (91%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 210 GTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACG 269 |||||||||| |||||| ||||||||||||||||||||||| ||||||||||||| | || Sbjct 138595 GTAATCTTGTCAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATTGCTCTTTAGCG 138654 Query 270 AGGAATGCCTAGTAAGCGCGTGTCATCAGC 299 |||||| |||||||||||| ||||||||| Sbjct 138655 AGGAATCCCTAGTAAGCGCAAGTCATCAGC 138684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947190897408