Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq337 233 3e-59 seq600 138 2e-30 seq322 125 1e-26 >seq337 Length=3204 Score = 233 bits (258), Expect = 3e-59 Identities = 225/282 (80%), Gaps = 14/282 (5%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| ||||||||||||||||||||| |||| |||||| Sbjct 2085 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 2142 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2143 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 2202 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| |||||| | | || |||| | ||| ||| | |||||||| ||||| | Sbjct 2203 GAACGCGGTGATAC-CACCCGCACGT-ATAGATGGACAAGAATAGGCCTCGGCTTAGCGT 2260 Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||||||||| | | |||| || |||||||| | | | | | ||| || Sbjct 2261 CTTAGCAGGCGATTCCTCCACGGCGCTC-----GAAGCGCGTCGTGGT-ATTTCGCGTAT 2314 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || ||||||| || | || ||| |||||||||||||||||| Sbjct 2315 TGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 2356 >seq600 Length=525 Score = 138 bits (152), Expect = 2e-30 Identities = 106/123 (86%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 249 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 306 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 307 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 366 Query 121 GAA 123 ||| Sbjct 367 GAA 369 >seq322 Length=6685 Score = 125 bits (138), Expect = 1e-26 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 2945 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAACTGCGGTTAGCTGAAAAGCTAGT 2888 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2887 GCCGCCAAGCTACCATCTGTAGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 2830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819192373504