Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq19 262 3e-65 seq17 208 6e-49 >seq19 Length=300009 Score = 262 bits (290), Expect = 3e-65 Identities = 541/797 (68%), Gaps = 7/797 (1%) Strand=Plus/Minus Query 66009 CAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGG 66068 |||| || || || ||||| ||||| | ||| ||||| || ||||| | || || | Sbjct 119422 CAAG-GACGCAAGATTGCAAACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCAG 119364 Query 66069 TGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATG 66128 ||||||| || || || ||||| || | |||| ||| || |||||||| ||||| Sbjct 119363 TGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGT 119304 Query 66129 CATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCC 66188 ||||||||| | |||| | || | |||||||| |||| ||| | ||||||| || Sbjct 119303 GATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACC 119244 Query 66189 AAAGAGCGCGTGCCTTCACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAATGTTCGTAG 66247 |||| | ||||| | | || | | |||| ||| | | ||||| | ||||| Sbjct 119243 AAAGCTTCTGAGCCTTGATAG-ACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTAC 119185 Query 66248 AGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATC 66307 || || || ||||| | |||| |||| || |||| || || ||||| Sbjct 119184 AGAGCCTCAAACTCGTCACCGTAACAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATA 119125 Query 66308 AGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCG 66367 || | ||| || || | || || ||||| |||||| |||||||| |||||||| || Sbjct 119124 AGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCAGAGAGCC 119065 Query 66368 TAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAAC 66427 ||| || || || ||||| |||||| | ||||| || || || | || |||||| Sbjct 119064 AGGAACAGGTCACGAGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAAC 119005 Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCG 66487 ||||||| |||||| ||||| || || |||||||| ||||| | || || ||| | Sbjct 119004 TCAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTTGTTG 118945 Query 66488 CCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCG 66547 ||||| |||||||| || ||||| |||||||| ||||||| ||| || || | ||| Sbjct 118944 CCACCCTGGTCGACATAACGAGCAGTGTTGTTGAATACACGCAGCATGGGAACCACGCCG 118885 Query 66548 TTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTC 66607 || || | || ||||| ||| | ||| || || || || || |||||| || Sbjct 118884 TTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATTCGGTGAACGTTT 118825 Query 66608 AGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATA 66665 | ||||||||||| ||| |||| || || |||||| || | |||| | | | Sbjct 118824 AAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTGTC--GTAGA 118767 Query 66666 TGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGG 66725 | ||||||||| ||| |||| || | ||| ||||||| || || || | | Sbjct 118766 TACCGTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCATGAGGACAGCTGAGGCTGAG 118707 Query 66726 GTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAAT 66785 | || |||| ||| || ||||| | ||| || || ||| | | || |||||| | Sbjct 118706 GGGTACCGGCGTTGAAAAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTGGACATGAGGT 118647 Query 66786 TGTACGTCTCGATGACA 66802 |||| ||||| | |||| Sbjct 118646 TGTATGTCTCCAAGACA 118630 >seq17 Length=315547 Score = 208 bits (230), Expect = 6e-49 Identities = 575/863 (67%), Gaps = 34/863 (4%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || ||||||||||| | |||||| | ||| | Sbjct 169756 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCCGAGGAGATTGATCTT 169697 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | ||||| | | | ||| || ||||| Sbjct 169696 TCCAAGGATCTCCACGACTGGAACAACCGTTTGACTACAGATGAGCAGTTCTTCATCTCC 169637 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || || ||||||||||| ||||| | | || || Sbjct 169636 CACATTCTTGCTTTCTTCGCTGCCTCCGATGGTATCGTCAACGAGAACCTTGTTGAGCGA 169577 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | ||||| || || |||||||| |||||||| || Sbjct 169576 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGAT 169518 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | ||||| ||||| ||||||| ||||| || Sbjct 169517 GGAGAACATCCACTCTGAGACATACTCCCTGCTCATTGATACCTACATCAAGGAGCCTGC 169458 Query 61383 GGAACGTGAACGAT---TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG- 61438 || | ||| || | ||||| ||| | || || || || || | | ||||| Sbjct 169457 CCAAAG--AAC-ATACCTCTTCAACGCCGTTGACACTATTCCT----TGCATCCGAAAGA 169405 Query 61439 ---CGGATTGGGCC-TTCAATTGGATCACCAGTACAACGGCTAC--ATTTGGTGAACGAT 61492 | || |||||| ||| || ||||| ||| |||| | || | ||||| | |||| Sbjct 169404 AGGCTGACTGGGCCATTCGAT-GGATC--CAGGACAAGGACTCCTCATTTGCTCAACGTC 169348 Query 61493 TGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTT 61552 | | || ||||| | || |||||| | || ||||| || | |||||| | ||||| | Sbjct 169347 TTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCT 169288 Query 61553 GGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCG 61612 || | ||||| ||||| || ||||| |||||||||||| ||| ||| | || || || | Sbjct 169287 GGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCCCGTG 169228 Query 61613 ACGAGGGCATGCATTGTGATTTTG-CTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCG 61670 | ||||| | || ||||||| |||| || || || || | || | || Sbjct 169227 ATGAGGGTCTTCACACCGATTTTGCCTGT----CTCCTC-CACTCTCACCTTAAGGGACG 169173 Query 61671 TCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATT 61730 | | || || | || || | || || || || ||||| ||||| || Sbjct 169172 TGCCAGCAAGCAGATGATCCAGGACATCATCACCGATGCCGTTACCATCGAGCAGGAGTT 169113 Query 61731 TCTGACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAATGTCGCAGT 61789 || || || ||| | ||| | | || | |||||||| | || ||| ||||| Sbjct 169112 CCTTACCGAGGCTCT-CCCTTGTGGTCTTCTAGGCATGAACTCCAACCTCATGAAGCAGT 169054 Query 61790 ATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATA 61849 | || || || || || || |||||| | || | | | |||| || | | || || Sbjct 169053 ACATCGAGTTCGTGGCTGATCGTCTGCTCGTTGCTCTCGGTAATGAGAAGGTGTACAAGG 168994 Query 61850 CGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCG 61909 | | |||||| || || |||||||| | || || || | ||||||||| || ||||||| Sbjct 168993 CCACAAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAACTTTTTCG 168934 Query 61910 AGAAACGTGTAGGCGACTATCAA 61932 |||| || || | |||||| ||| Sbjct 168933 AGAAGCGCGTTGCCGACTACCAA 168911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563343609040