Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq12 176 3e-42 seq6 176 3e-42 >seq12 Length=8749402 Score = 176 bits (194), Expect = 3e-42 Identities = 110/117 (94%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| || Sbjct 8735582 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAT-ATAACATCGTCC 8735640 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 8735641 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 8735697 Score = 176 bits (194), Expect = 3e-42 Identities = 110/117 (94%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| || Sbjct 8739356 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAT-ATAACATCGTCC 8739298 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 8739297 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 8739241 Score = 168 bits (186), Expect = 4e-40 Identities = 109/117 (93%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| || Sbjct 8747557 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAT-ATAACATCGTCC 8747499 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 8747498 GATCCCTAGTCGGCATAGTTTATGGTTAAG-CTACGACGGTATCTGATCGTCTTCGA 8747443 >seq6 Length=13654 Score = 176 bits (194), Expect = 3e-42 Identities = 110/117 (94%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| || Sbjct 3922 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAT-ATAACATCGTCC 3864 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3863 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3807 Score = 170 bits (188), Expect = 1e-40 Identities = 108/117 (92%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||||| |||| || |||| ||||| Sbjct 6638 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGGGTCATCATAGAAACACCGCCC 6579 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 6578 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 6522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399955630