Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07]
17 sequences; 45,813,297 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq12 176 3e-42
seq6 176 3e-42
>seq12
Length=8749402
Score = 176 bits (194), Expect = 3e-42
Identities = 110/117 (94%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| ||
Sbjct 8735582 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAT-ATAACATCGTCC 8735640
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 8735641 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 8735697
Score = 176 bits (194), Expect = 3e-42
Identities = 110/117 (94%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| ||
Sbjct 8739356 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAT-ATAACATCGTCC 8739298
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 8739297 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 8739241
Score = 168 bits (186), Expect = 4e-40
Identities = 109/117 (93%), Gaps = 2/117 (2%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| ||
Sbjct 8747557 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAT-ATAACATCGTCC 8747499
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 8747498 GATCCCTAGTCGGCATAGTTTATGGTTAAG-CTACGACGGTATCTGATCGTCTTCGA 8747443
>seq6
Length=13654
Score = 176 bits (194), Expect = 3e-42
Identities = 110/117 (94%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| ||
Sbjct 3922 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAT-ATAACATCGTCC 3864
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3863 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3807
Score = 170 bits (188), Expect = 1e-40
Identities = 108/117 (92%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| |||||||||||||||||||||||||||| |||| || |||| |||||
Sbjct 6638 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGGGTCATCATAGAAACACCGCCC 6579
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 6578 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 6522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278399955630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |