Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq6 178 2e-42 seq12 159 4e-37 >seq6 Length=13654 Score = 178 bits (196), Expect = 2e-42 Identities = 157/192 (82%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 6377 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 6318 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct 6317 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCCCCC-CA 6259 Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGGTAGGG-CTGGGTAATGCAGTACTCGCC 183 || ||| ||||||| || || ||| ||| | || | | |||||||||| Sbjct 6258 CAGCCAGTGAAGGCCATGAGGTTCCCCAGAAGGAAAGGTCCAGCCGGACCAGTACTCGCG 6199 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 6198 GTGAGGCGGACC 6187 Score = 159 bits (176), Expect = 4e-37 Identities = 152/192 (79%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 3663 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 3604 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||| | || |||||||||||| ||| |||||||||||| |||| | || Sbjct 3603 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCACAGTAAAAGTCCTGTTTCCCCGCCA 3544 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183 || ||| |||| ||||| || ||| || | ||| | || |||||| ||| Sbjct 3543 CACCCAGTGAAGGGCATGGGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTACACGCG 3484 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 3483 GTGAGGCGGACC 3472 >seq12 Length=8749402 Score = 159 bits (176), Expect = 4e-37 Identities = 152/192 (79%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 8735841 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 8735900 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||| | || |||||||||||| ||| |||||||||||| |||| | || Sbjct 8735901 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCACAGTAAAAGTCCTGTTTCCCCGCCA 8735960 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183 || ||| |||| ||||| || ||| || | ||| | || |||||| ||| Sbjct 8735961 CACCCAGTGAAGGGCATGGGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTACACGCG 8736020 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 8736021 GTGAGGCGGACC 8736032 Score = 159 bits (176), Expect = 4e-37 Identities = 152/192 (79%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 8739097 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 8739038 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||| | || |||||||||||| ||| |||||||||||| |||| | || Sbjct 8739037 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCACAGTAAAAGTCCTGTTTCCCCGCCA 8738978 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183 || ||| |||| ||||| || ||| || | ||| | || |||||| ||| Sbjct 8738977 CACCCAGTGAAGGGCATGGGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTACACGCG 8738918 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 8738917 GTGAGGCGGACC 8738906 Score = 159 bits (176), Expect = 4e-37 Identities = 154/191 (81%), Gaps = 5/191 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||| |||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 8747302 CTAGAAAC-AACAAAATAGA-AC-CACGTCCTATTCTATTATTCCATGCTAATGTATTCG 8747246 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||| | || |||||||||||| ||| |||||||||||| |||| ||||| Sbjct 8747245 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCACAGTAAAAGTCCTGTTTCC-CCGCA 8747187 Query 126 CACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCG 184 ||||| |||| ||||| || ||| || | ||| | || |||||| ||| | Sbjct 8747186 CACCAGTGAAGGGCATGGGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTACACGCGG 8747127 Query 185 TGAGGCGGACC 195 ||||||||||| Sbjct 8747126 TGAGGCGGACC 8747116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199901978