Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq11 313 2e-80 seq10 206 2e-48 >seq11 Length=4934405 Score = 313 bits (346), Expect = 2e-80 Identities = 634/930 (68%), Gaps = 12/930 (1%) Strand=Plus/Plus Query 66001 GGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGAC 66060 ||||||||| || || || |||||||||||||| | ||| ||||| || ||||||| Sbjct 3280368 GGGAAGGGCGAGGGAGGCAAGGTTGCAGACAGCAACCTCATCAGGGGCACAGTACTCGAT 3280427 Query 66061 AATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCG 66120 ||| |||||||| || || || ||| ||||| || | |||| || || |||||||| Sbjct 3280428 AATCTCGGTGCAAAGGTTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCG 3280487 Query 66121 ATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180 ||||| ||||||||| | |||| | || |||| |||||| || | ||| | ||| Sbjct 3280488 GTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCAGTCTGAGCCTCGAGGAT 3280547 Query 66181 GGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCT-ACCTTTGCGTTCG--TA 66237 ||| | ||| || | ||||||| || | | | |||| ||| || ||| || Sbjct 3280548 GGCATACCAGAGCTTCTGGGCCTTCATGGT-CTTGCGACCCTTACCA--GCCTTCTCATA 3280604 Query 66238 ATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTG 66297 | ||||| || ||||| ||||| | |||| || | ||||||| || Sbjct 3280605 CTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGGCCGGGACACTCGTT 3280664 Query 66298 TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTAT 66357 |||||||| || | ||| ||||| | || || ||||| ||| || ||||| || || Sbjct 3280665 GGGACACATGAGAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAAT 3280724 Query 66358 CCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAA 66417 |||||| || ||| || ||||| || || |||||| ||||||| || ||||||| Sbjct 3280725 CCAGAGAGCCAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAG 3280784 Query 66418 GTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477 ||| ||||||||||||| || || ||||| || || ||||||||||| || | || Sbjct 3280785 GTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGG 3280844 Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537 || || |||||| || |||||||| || || |||||||||||||| | ||| || Sbjct 3280845 TCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGGAGCATGGG 3280904 Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597 | ||||| || | || ||||| ||| ||||| || || || || || Sbjct 3280905 GGTAACACCGTTGGAGGTACCGTTGGTACCGGCGATGTAAGAACCAGTGGCACGGATTCG 3280964 Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACT 66655 ||| || ||||| ||||||||||| ||| |||| || || |||||| || | | | Sbjct 3280965 GTGCACGTTCAGGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGT 3281024 Query 66656 GTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGT 66715 || |||| || ||||| ||| |||| ||| | ||| ||||||| || Sbjct 3281025 ATCATAAATA--CCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGC 3281082 Query 66716 TGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGA 66775 ||||| | ||| || | || |||||||||||| | ||||| || ||| | | || Sbjct 3281083 TGGGGCTGGGGGGTACCCGCATTGAAGAGGGTGGGGGAGGCGTGAGTGAAGAACTTGCTC 3281142 Query 66776 GACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-C 66834 |||||| ||||| ||||||| |||| |||||||| || || || |||| | | Sbjct 3281143 GACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGTTGTCACCCCAGATGCCGACAGCC 3281202 Query 66835 ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTA 66894 ||| ||||| | | || || || || || || | | | | || | | | ||| Sbjct 3281203 ACA-CGCATGATCATGTGCTGGGGGCGCTCAACAATCTTGCCATCAATCTTGAGGAGGTA 3281261 Query 66895 GGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 || || || |||||||||| |||||||| Sbjct 3281262 AGATCGCTCAAGGGTCTTGAAGCCAAAGTA 3281291 >seq10 Length=5928648 Score = 206 bits (228), Expect = 2e-48 Identities = 565/856 (66%), Gaps = 22/856 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | ||||||| | ||| || Sbjct 4471214 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCGGAGGAGATTGATCTG 4471155 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || | | || || || ||||| Sbjct 4471154 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACCTCCGACGAGCAGTTCTTCATCTCT 4471095 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||||||||| || ||||| |||||||| ||||| | | || || Sbjct 4471094 CACATTCTTGCCTTCTTTGCCGCCTCTGACGGCATCGTCAACGAGAACCTTGTTGAGCGA 4471035 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | ||||| || || |||||||| |||||||| || Sbjct 4471034 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGAT 4470976 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | ||||| || || || |||| ||||| | Sbjct 4470975 GGAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGACACCTATATCAAGGAGCCTTC 4470916 Query 61383 GGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG--- 61438 | || | | | | ||||| ||||| ||||| || || || | | | ||| Sbjct 4470915 CCAGCGA-ACCTACCTCTTCAACGCCATTGAGACCATCCCT----TGCATCCGCAAGAAG 4470861 Query 61439 -CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTA--CATTTGGTGAACGATTGC 61495 | || |||||| || |||||| ||| |||| | || | |||| | || | Sbjct 4470860 GCCGACTGGGCCATCCGATGGATC--CAGGACAAGGACTCTTCCTTTGCCCAGCGTCTCG 4470803 Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 | || || || | ||||||||| | |||||||| || | ||||| | ||||| ||| Sbjct 4470802 TTGCCTTCGCTGCCGTCGAGGGTATCTTTTTCAGCGGTGCCTTTGCTTCCATCTTCTGGC 4470743 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 | ||||| ||||| || |||||||||||||||||| || ||||| ||||| || || | Sbjct 4470742 TCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCTAACGAGTTAATATCTCGTGATG 4470683 Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675 |||| | || || ||||| | || || | | | || | ||| | Sbjct 4470682 AGGGTCTTCACACCGACTTTGC---CTGCCTCCTCCACTCCCACCTCAAGGGCCGTGCTA 4470626 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 || || | || || | ||| || || || || || ||||| || |||| Sbjct 4470625 GCAAGCAGGTCATCCAGGACATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCCTGA 4470566 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 |||| ||| | ||| | | || |||||||||| | || ||| |||||| || | Sbjct 4470565 CTGAGGCTCTCCCCTGCGCCCTTCTCGGCATGAACGCCGATCTCATGAAGCAGTACATCG 4470506 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 | || || || |||||||| |||||| | || | || | |||| || | | Sbjct 4470505 AGTTCGTCGCTGACCGTCTTCTGGTCGCCCTCGGCAACGAGAAGGTCTACAAGTCCGCCA 4470446 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 |||| || || |||||||| | || || |||| ||||||||| || || |||||||| | Sbjct 4470445 ACCCCTTCGACTTCATGGAGAACATCTCTCTGGGTGGCAAGACCAACTTCTTCGAGAAGC 4470386 Query 61916 GTGTAGGCGACTATCA 61931 |||| || ||||| || Sbjct 4470385 GTGTCGGTGACTACCA 4470370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567917628880